Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4235 ATGTCTATCTTGAAAATTTCTTTCATATTTTCCATATTTCTCTTACTTTTTCACTCAACAGAAAGCACAATTCAAAATAATTGCGTAAGGAAATATTGTGGAAACCCTGAGTTAGGTCTTCTTTTTGAGTTCCCTTTCATCTTGAGAGAACCGTATCAAAATATCAATAATCAAAGTGATCGATGTGGATATCCAGGGTTTGACGTTTTTTGCCACCATTATAAAGAAGCTGTGCTTAAACTCTCAAATGATAGAAATTTTGTAGTCAAAAGTATTTCTCTTGAGAGACAAAGAATTTGGGTGAACGGTCCCAATGATTGTCCACCACAAAGATTCATTGAAAACATAAACATCAACGATGATTCACCTTTTGCATGGGACAACACTTTTCATAGTCATTATGAAAATGTGACATTTCTCAACTGTAGTACCAATTCTGGAAAGGAACCAAATCCAGTGATTGATGAACTTCCAATTATACCTTGTATGGGCAATGCGAATTATTCGATTATGTATACGTTGCAACCATCACTGGTTAATTCTTTGAATTTGTCGTGTCGTGAGATTGGATTTGCTAGGGTTCCAGTCAAAGATAATTCACAGCAAGCATTGGTAATCATGGATGGACTTTACTCTGATGCAATGTTGCGATGGAGTACACCTTCATGTGGTTGTGAACCTGATCAATCCTGTGGCTTTATAACGGATACGAGTCTTGATGTTACTTGTTACAAGCACAACTACATTTTTGATTTCCCAGTTGGAAATCCTTCGACTCAAAAGCATAAAAAGTTTAACTTTTTTCCAATACTTTGGGGAATATTAGGAGTTTTGTTCTTCATGTGGGTCTCTTTAATCATATATAGAGATAGACAGCAAGCCCATATTCCACAAAGACAAACTATTACAAACATGGAACCAATTAATCGAGAACCACCTTGGTTTATGTTTGGACTTGATAGATCAAGAATAGAACAATATCCAAAGATTCAACTATCTGAAAGTGGACCAATTTAA 1017 0.353 MSILKISFIFSIFLLLFHSTESTIQNNCVRKYCGNPELGLLFEFPFILREPYQNINNQSDRCGYPGFDVFCHHYKEAVLKLSNDRNFVVKSISLERQRIWVNGPNDCPPQRFIENININDDSPFAWDNTFHSHYENVTFLNCSTNSGKEPNPVIDELPIIPCMGNANYSIMYTLQPSLVNSLNLSCREIGFARVPVKDNSQQALVIMDGLYSDAMLRWSTPSCGCEPDQSCGFITDTSLDVTCYKHNYIFDFPVGNPSTQKHKKFNFFPILWGILGVLFFMWVSLIIYRDRQQAHIPQRQTITNMEPINREPPWFMFGLDRSRIEQYPKIQLSESGPI* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4235 338 PANTHER RING-H2 FINGER PROTEIN ATL69-RELATED 5 336 - -
Psa2g4235 338 Pfam Wall-associated receptor kinase galacturonan-binding 28 102 IPR025287 GO:0030247
Psa2g4235 338 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4235 Psa-Chr2 423905749 423907500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4235 26 335 C3H Transcription Factor Family AT2G46495 27.070 5.22e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4235 - - mtr:MTR_5g009190 310.842