Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4224 ATGTCATATGTAACATTTTCTGGTACTAAAAACAATAACATTTGTAGCAGTAGTAGTAATATGAGGAAGTTGTCTAATATGGATGATACTAATAATGTTGTAGCAGACATTAATATCAATAAATCTAAACAAATTGAACGGCGTTACGAAGACTATCGAAGGAAGAGAAAGCGTCCTTGTAAAGCGCCGGTGATCCCTACGATGGAATCAACTACGGGAGACACGGCCACGGCTTCACACGGTTTTATATCTGTGATTGGACGGAGGAGGGTGATGGAAGACGCTATCAAGGTGATTCCTCGTTTCATGGCGGCGAAACAGCAACCGTGTGGATACGATTTCTTTGCGGTTTATGACGGACATGGTGGGATGACGGTGGCGAATGCTTGTCGTGATAGGTTGCACTTGTTGTTGGCAGAGGAAGTGAAGGAAGGTGGAGATCATGGATTGGATTGGTATAAAGCTATGTGTTCTTGTTTCATGAAGATGGATCATGAAATTGGAGTCGCTGGTGGTGGCAGTGGTGATGTTGATGCGGACAACGTGGGTTCAACGGCGGCTGTGGTGGTGGTTGGGAAAGAGGAGATAGTGGTGGCGAACTGTGGTGACTCAAGGGCGGTTTTGTGTAGTGGCGGTGTAGCAGTTGCACTTTCACGTGATCATAAGCCCGATCTTCCGGATGAAAGAGAGAGGATTGAAGCAGCTGGTGGAAAAGTGATTAATTGGAACGGGAGTCGCGTTCTAGGAATTCTTGCTACTTCTAGATCCATAGGGGACCATTGCATGAAGCCATTTGTGATATCTCAACCAGAGATAAACGTGCATGGAAGAACAAAATCAGATGAGTTTGTTGTGGTGGCAAGTGATGGGCTTTGGGATGTTGTATCAAACAGTTTTGTTTGTGAAGTTGTTAAAAGCTGTCTCCAAGGTCATATGAGGAGGAATAATAGCGATAATGTAAAAGAGGATCTCACTTTTAAAGGTTATGCAGCTGAAGCTGCTGCAATTTTAGCTGAATTGGCTATGGCTAAGGGAAGCAAAGACAACATCAGTATTATAGTCATTCAACTCAACACTAACATTTGA 1086 0.4374 MSYVTFSGTKNNNICSSSSNMRKLSNMDDTNNVVADININKSKQIERRYEDYRRKRKRPCKAPVIPTMESTTGDTATASHGFISVIGRRRVMEDAIKVIPRFMAAKQQPCGYDFFAVYDGHGGMTVANACRDRLHLLLAEEVKEGGDHGLDWYKAMCSCFMKMDHEIGVAGGGSGDVDADNVGSTAAVVVVGKEEIVVANCGDSRAVLCSGGVAVALSRDHKPDLPDERERIEAAGGKVINWNGSRVLGILATSRSIGDHCMKPFVISQPEINVHGRTKSDEFVVVASDGLWDVVSNSFVCEVVKSCLQGHMRRNNSDNVKEDLTFKGYAAEAAAILAELAMAKGSKDNISIIVIQLNTNI* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4224 361 ProSitePatterns PPM-type phosphatase domain signature. 114 122 IPR000222 GO:0043169
Psa2g4224 361 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 26 359 - -
Psa2g4224 361 Pfam Protein phosphatase 2C 80 350 IPR001932 -
Psa2g4224 361 CDD PP2Cc 79 357 IPR001932 -
Psa2g4224 361 ProSiteProfiles PPM-type phosphatase domain profile. 79 357 IPR001932 -
Psa2g4224 361 PANTHER ALPHABET, ISOFORM E-RELATED 26 359 - -
Psa2g4224 361 SMART PP2C_4 69 355 IPR001932 -
Psa2g4224 361 SUPERFAMILY PP2C-like 74 358 IPR036457 -
Psa2g4224 361 Gene3D - 74 360 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4224 Psa-Chr2 423301523 423303107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4224 74 357 PP2C-type Phosphatase Gene Family AT2G29380 46.599 9.36e-82 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4224 K14497 - gmx:100813248 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4224 2 423301523 423303107 Psa2g4224 2 423301523 423303107 ECH