Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4218 ATGGGGACTGAAATTGAGTCAAAAGATAGCTCTCTCATTCTCATCAAGCAAGGAGCTGAAGCTAGAGTTTTTGAGTCTTCTTTTGTGGGAACAAGGTCTGTTGTCAAGGAGCGATTCTCAAAGAAGTACAGGCATCCAACTTTGGATTCTAAGTTAACACTCAAGCGCTTAAACGCGGAGGCAAGGTGCACAACCAAAGCAAGACGACTTGGAGTGTGTACACCTGTGTTGTATGCCGTGGATCCTGTGTCGCACACTTTAACGTTTGAATTTGTTGACGGACCTTCAGTCAAGGATGTGTTTCTTGAATTCGGATCATGTGGTGTCAATGAAGAGCGGCTTGGCAAGATTGCATCCCAAATTGGTGATGTTATTGCAAAGTTACATGATGGTGGTCTTGTTCATGGTGACTTAACAACATCGAACATGTTACTAAGGAATAATGAAGAGCGGCTTGGCAAGATTGCATCCCAAATTGGTGATGTTATTGCAAAGTTACATGATGGTGGTCTTGTTCATGGTGACTTAACAACATCGAACATGTTACTAAGGAATGATACTGATCAGTTGGTTCTTATTGACTTTGGTTTGAGCTTCACTTCAACTTTACCCGAAGATAAAGCTGTTGATTTGTATGTCCTGGAAAGAGCCCTTGTTTCGATGCATTCTTCATGTGGCAACATTATTGATCGGATCCTTGCTGCTTACCGCAAGTCATCGAAGCAGTGGTCATCCACAATGAACAAGCTGGCAGACGTGCGACAAAGAGGACGAAAGAGGACCATGGTTGGTTGA 795 0.4314 MGTEIESKDSSLILIKQGAEARVFESSFVGTRSVVKERFSKKYRHPTLDSKLTLKRLNAEARCTTKARRLGVCTPVLYAVDPVSHTLTFEFVDGPSVKDVFLEFGSCGVNEERLGKIASQIGDVIAKLHDGGLVHGDLTTSNMLLRNNEERLGKIASQIGDVIAKLHDGGLVHGDLTTSNMLLRNDTDQLVLIDFGLSFTSTLPEDKAVDLYVLERALVSMHSSCGNIIDRILAAYRKSSKQWSSTMNKLADVRQRGRKRTMVG* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4218 264 ProSitePatterns Tyrosine protein kinases specific active-site signature. 133 145 IPR008266 GO:0004672|GO:0006468
Psa2g4218 264 Pfam Lipopolysaccharide kinase (Kdo/WaaP) family 154 221 - -
Psa2g4218 264 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g4218 264 Gene3D Transferase(Phosphotransferase) domain 1 108 150 - -
Psa2g4218 264 Gene3D Transferase(Phosphotransferase) domain 1 151 261 - -
Psa2g4218 264 SUPERFAMILY Protein kinase-like (PK-like) 14 149 IPR011009 -
Psa2g4218 264 SMART serkin_6 9 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g4218 264 ProSitePatterns Tyrosine protein kinases specific active-site signature. 171 183 IPR008266 GO:0004672|GO:0006468
Psa2g4218 264 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 15 149 IPR022495 GO:0004674
Psa2g4218 264 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 152 258 IPR022495 GO:0004674
Psa2g4218 264 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 2 152 IPR022495 GO:0004674
Psa2g4218 264 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 149 264 IPR022495 GO:0004674
Psa2g4218 264 SUPERFAMILY Protein kinase-like (PK-like) 150 239 IPR011009 -
Psa2g4218 264 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 149 264 - -
Psa2g4218 264 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 2 152 - -
Psa2g4218 264 Gene3D Phosphorylase Kinase; domain 1 20 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4218 Psa-Chr2 423075488 423077411 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Cr-3 Psa2g4218 Kdo 5.1e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4218 K08851 - gmx:100782376 363.999