Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4210 ATGGGCAACCGCAGCAGCAGAACCAAAACGAAACCCTCCTCCGATTCCCAAACCGAAACCCGTTCAAAATCAAACCCTCAAAATTCCACTCTCATTTCCTTCCCCCCTCCCAATCAACCAACCCCAACCCCAACGCCCCCTCCTTCCTCTCCCGTCGGCCGCGTCTTAGGCCGGCCCATGGAAGACGTCCGATCCACCTACATCTTCGGCCGCGAATTAGGTCGTGGTCAATTCGGAGTCACATATCTAGTAACTCACAGAGTCACCAAGGAGCAATTCGCCTGCAAATCAATCGCCACGCGGAAGCTAATCCGCCGCGATGATTTGGATGATATCCGCCGTGAAGTTCAGATCATGCATCACCTCACCGGTCACCGTAACATCGTTGAGCTTAAAGGTGCTTATGAGGATCGGCATTCAGTTAACCTCATCATGGAACTCTGTGCCGGCGGTGAACTCTTTGATAGGATTATATCTAAAGGACATTACTCCGAGCGTGCTGCTTCTGAATTGTGTCGCCAGATGTTGGCCGTTGTTCATAATTGTCACACCATGGGAGTTATGCACAGGGATTTGAAACCCGAGAATTTCTTGTTCCTCAGTAAGCATGAAACTTCGCCTCTTAAAGCCACTGATTTCGGTCTCTCTGTGTTTTTCAAACCCGGAGATGTATTTAAAGATCTTGTTGGGAGTGCGTATTATGTTGCACCTGAGGTGTTGCGTAGAAGTTATGGCCCCGAAGCTGATATTTGGAGTGCTGGGGTTATTTTGTATATTCTCCTCTCTGGCGTCCCTCCCTTCTGGGCAGAAAATGAACAGGGTATCTTCGATGCTATTCTTCATGGACATATTGATTTTGCATCGGAACCTTGGCCTAAAATATCAAGTAATGCTAAAGGTCTGATCAAGAAGATGTTGCGAGCTGACCCTAAAGAACGACTTTCAGCTGTTGAAGCCCTTAATCATCCTTGGATGAGACATGATGGAGCACCCGATAAGCCTCTTGATATTGCTGTTTTAACCAGAATGAAACAATTCAGGGCAATGAACAAGCTAAAGAAAGTAGCTCTGAAGGTTATTGCTGAAAATCTTTCTGAAGAAGAAATTATTGGCTTGAAGGAAATGTTTAAATCCATGGACACAGATAATAGTGGAACAGTCACTTTTGAAGAGTTGAAAGCTGGTCTCCCCAAACTAGGTACTAAGATATCTGAGTCTGAAGTAAGGCAGTTAATGGAAGCGGTAAGATTTCTTTTACACCATTAA 1266 0.4566 MGNRSSRTKTKPSSDSQTETRSKSNPQNSTLISFPPPNQPTPTPTPPPSSPVGRVLGRPMEDVRSTYIFGRELGRGQFGVTYLVTHRVTKEQFACKSIATRKLIRRDDLDDIRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMELCAGGELFDRIISKGHYSERAASELCRQMLAVVHNCHTMGVMHRDLKPENFLFLSKHETSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRSYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAILHGHIDFASEPWPKISSNAKGLIKKMLRADPKERLSAVEALNHPWMRHDGAPDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTVTFEELKAGLPKLGTKISESEVRQLMEAVRFLLHH* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4210 421 SMART efh_1 371 399 IPR002048 GO:0005509
Psa2g4210 421 SMART serkin_6 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g4210 421 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 1 19 415 - -
Psa2g4210 421 MobiDBLite consensus disorder prediction 1 32 - -
Psa2g4210 421 CDD EFh 372 415 IPR002048 GO:0005509
Psa2g4210 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Psa2g4210 421 ProSitePatterns EF-hand calcium-binding domain. 380 392 IPR018247 -
Psa2g4210 421 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Psa2g4210 421 Gene3D Phosphorylase Kinase; domain 1 61 152 - -
Psa2g4210 421 SUPERFAMILY EF-hand 350 415 IPR011992 -
Psa2g4210 421 Gene3D Transferase(Phosphotransferase) domain 1 153 331 - -
Psa2g4210 421 Gene3D - 332 417 - -
Psa2g4210 421 MobiDBLite consensus disorder prediction 33 53 - -
Psa2g4210 421 Pfam Protein kinase domain 69 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g4210 421 Pfam EF hand 372 398 IPR002048 GO:0005509
Psa2g4210 421 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 415 - -
Psa2g4210 421 CDD STKc_CAMK 67 324 - -
Psa2g4210 421 ProSiteProfiles EF-hand calcium-binding domain profile. 367 402 IPR002048 GO:0005509
Psa2g4210 421 SUPERFAMILY Protein kinase-like (PK-like) 64 338 IPR011009 -
Psa2g4210 421 MobiDBLite consensus disorder prediction 1 54 - -
Psa2g4210 421 ProSiteProfiles Protein kinase domain profile. 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4210 Psa-Chr2 422945364 422948811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4210 53 414 EF-hand Containing Proteins AT4G23650 81.267 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Psa2g4210 Pkinase 3.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4210 K13412 - gmx:100808536 671.774