Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g4201 | ATGGAACAGAAAGGTTTGTTGATATCAGCGCTTAGCGTTGGTGTTGGAGTTGGAGTCGGCCTTGGTTTGGCTTCTGGACAAACCAAATGGGGAGCTAATGCTTTCGCCACAAACGCCATCACACCCGAGAAAATCGAACACGAAATGCTTCGACTTGTTGTTGATGGCAGAGAAAGCAATGTCACTTTTGACAATTTCCCTTATTATCTCAGTGAGAAGACACGGGTGTTGCTGACAAGTGCTGCCTATGTCCATTTAAAGCATGCAGAGGTTTCTAAATATACACGGAATCTCGCTCCTGCAAGCCGGACTATTCTGCTCTCAGGGCCAGCCGAACTTTACCAACAGGTGCTTGCTAAGGCTTTAGCTCACTACTTTGAGGCCAAGTTGCTTCTGTTCGATGTAACTGACTTTTCTTTGAAGATTCAAAGTAGATATGGCTCTTCCATCAACGAAACTTCTTTCAAAAGATCTACTTCAGACACAACTTTGGCTCGGCTATCTGACCTATTTGGTTCATTTTCAATCTTTCCACCAAAAGAAGAGATTAAAGTTGCAGGTAGAATGCAAAAGCAAAGGAGTGGCGTAGACCTTAAACGAATGGAGGCGGAAGGATCTCATACTCCTACTAAGCTTCGTAGGAATGCATCAGCCTCTGCAAATATTAGCAGCCTTGGTTCGCAAAGCAATCCTACAAGCTCAGCACCTGGGAAGCACATGGCCAATTGGTCTTTTGATGAAAAGCTTCTTATACAGACTCTTTACAAGGCTCTAGTTTATGTGTCAAAAACCTATCCCATTGTTCTATATCTGCGGGATGTTGATAAGCTGTTGTGTAGATCACAGAGGATATGTAAACTATTCCAGACAATGTTAACGAAATTATCTGGACCAATTTTGATTCTTGGTTCAAGGGTTTTGGATTCTGGTAATGAATGCAAAGAAGTGGATGAGATGCTTAGCCCCCTCTTCCCTTACAACATAGAAATCAGCCCACCAGAAGATGAGTCTCGTCTTGTCAGCTGGAAGTCTCAATTTGAAGAGGATATGAAGAAGATACAGATTCAGGATAACAAGAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGATTGTCATGACCTGGATTCCATCTGTGTGGCAGACACAATGGTTCTCAGTAACTATATAGAAGAGATTGTTGTATCAGCAATTTCTTATCATTTAATGAATAACAAAGAGCCTGATTACAGAAATGGGAAACTGGTTATTCCATGCAATAGCTTGTCCCATGCTCTGGGTATATTCCACGAGGGAAAACTCAGTGGAAGAGATACATTAAAACTAGAAGCTCAAGCAGTAACATCTGAGAGAGAGGAAGCAGCTGTTACGAAACCAGCAGAAAAGTCTGAAAATCCTGCTCCTGGTATAAAAACTGAAAATCCTGCTCCTGGTATAAAAACTGAAAATCCTGCTCCTGGTATAAAGGCTGAAACAGAAATACTAACTTCAGTGGGCAAAACTGATGGTGAAAATTCAGTTCCTGCAACCAAAGCTGAAGCTCCTCCCGATAATGAGTTTGAGAAGCGAATAAGGCCTGAAGTAATACCAGCAAACGAAATTGGGGTAACATTCTCCGACATTGGTGCCTTAGAGGAGACGAAAGAGTCACTTCAAGAACTTGTAATGCTTCCCCTTCGAAGGCCAGACCTTTTTGATGGAGGCCTTTTAAAGCCTTGTAGAGGAATATTGCTATTTGGGCCGCCTGGAACAGGAAAAACAATGCTGGCAAAGGCCATTGCAAATGAGGCTGGAGCAAGTTTCATTAATGTATCCATGTCTACCATCACCTCTAAATGGTTTGGTGAAGACGAGAAAAATGTCCGTGCTTTATTCACACTGGCAGCCAAGGTCTCCCCAACTATTATATTTGTTGATGAGGTGGATAGTATGCTTGGGCAGCGGACAAGGGTCGGGGAACATGAAGCCATGCGGAAAATAAAGAATGAATTTATGACCAATTGGGATGGACTTACCTCAAAACCATCCGATCGCATCCTTGTCCTTGCTGCAACCAATAGGCCCTTTGACTTGGATGAAGCAATTATTAGACGATTTGAAAGGAGGATTATGGTTGCGCTACCATCTGTGGAGAACAGGGAGAATATATTGAGGACCCTTTTGGCTAAAGAGAAAGTGGATGGTGGACTTGATTTTAAGGAACTCGCAACTATGACAGAAGGATTCAGCGGAAGCGATCTAAAGAACTTATGTACAACCGCTGCTTATAGACCTGTTAGAGAGTTAATTCAGCAAGAGATAAAAAAGGATTTGGAAAAAAAGAAGAAAGACGCCGAAGGACAAAATAGCCAAGATGGTCATGATGCAGAGAAGGAAGTTAAACAGGAAAGAGTTATTACCCTTAGGCCTTTGAATATGCAGGACTTCAAAGTGGCAAAGAGTCAGGTTGCCGCAAGCTTTGCAGCCGAAGGGGCTGGAATGAATGACTTGAAGCAGTGGAATGACCTTTATGGGGAAGGTGGTTCAAGGAAGAAAGAGCAATTATCTTATTTCCTATGA | 2562 | 0.4254 | MEQKGLLISALSVGVGVGVGLGLASGQTKWGANAFATNAITPEKIEHEMLRLVVDGRESNVTFDNFPYYLSEKTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQVLAKALAHYFEAKLLLFDVTDFSLKIQSRYGSSINETSFKRSTSDTTLARLSDLFGSFSIFPPKEEIKVAGRMQKQRSGVDLKRMEAEGSHTPTKLRRNASASANISSLGSQSNPTSSAPGKHMANWSFDEKLLIQTLYKALVYVSKTYPIVLYLRDVDKLLCRSQRICKLFQTMLTKLSGPILILGSRVLDSGNECKEVDEMLSPLFPYNIEISPPEDESRLVSWKSQFEEDMKKIQIQDNKNHIMEVLAANDLDCHDLDSICVADTMVLSNYIEEIVVSAISYHLMNNKEPDYRNGKLVIPCNSLSHALGIFHEGKLSGRDTLKLEAQAVTSEREEAAVTKPAEKSENPAPGIKTENPAPGIKTENPAPGIKAETEILTSVGKTDGENSVPATKAEAPPDNEFEKRIRPEVIPANEIGVTFSDIGALEETKESLQELVMLPLRRPDLFDGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTNWDGLTSKPSDRILVLAATNRPFDLDEAIIRRFERRIMVALPSVENRENILRTLLAKEKVDGGLDFKELATMTEGFSGSDLKNLCTTAAYRPVRELIQQEIKKDLEKKKKDAEGQNSQDGHDAEKEVKQERVITLRPLNMQDFKVAKSQVAASFAAEGAGMNDLKQWNDLYGEGGSRKKEQLSYFL* | 854 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g4201 | 853 | Coils | Coil | 765 | 785 | - | - | |
Psa2g4201 | 853 | CDD | AAA | 575 | 708 | - | - | |
Psa2g4201 | 853 | ProSitePatterns | AAA-protein family signature. | 680 | 699 | IPR003960 | GO:0005524|GO:0016887 | |
Psa2g4201 | 853 | MobiDBLite | consensus disorder prediction | 774 | 796 | - | - | |
Psa2g4201 | 853 | MobiDBLite | consensus disorder prediction | 188 | 213 | - | - | |
Psa2g4201 | 853 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 1 | 853 | - | - | |
Psa2g4201 | 853 | MobiDBLite | consensus disorder prediction | 449 | 519 | - | - | |
Psa2g4201 | 853 | Pfam | ATPase family associated with various cellular activities (AAA) | 577 | 706 | IPR003959 | GO:0005524|GO:0016887 | |
Psa2g4201 | 853 | Gene3D | - | 709 | 792 | - | - | |
Psa2g4201 | 853 | Gene3D | - | 536 | 795 | IPR027417 | - | |
Psa2g4201 | 853 | SMART | AAA_5 | 573 | 710 | IPR003593 | - | |
Psa2g4201 | 853 | MobiDBLite | consensus disorder prediction | 188 | 209 | - | - | |
Psa2g4201 | 853 | Pfam | AAA+ lid domain | 731 | 773 | IPR041569 | - | |
Psa2g4201 | 853 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 537 | 777 | IPR027417 | - | |
Psa2g4201 | 853 | PANTHER | P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN | 1 | 853 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g4201 | Psa-Chr2 | 422517216 | 422523632 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g4201 | 537 | 767 | Calmodulin-binding Proteins | AT3G56690 | 37.179 | 6.50e-40 | 157 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g4201 | - | - | gmx:100808011 | 1290.4 |