Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4201 ATGGAACAGAAAGGTTTGTTGATATCAGCGCTTAGCGTTGGTGTTGGAGTTGGAGTCGGCCTTGGTTTGGCTTCTGGACAAACCAAATGGGGAGCTAATGCTTTCGCCACAAACGCCATCACACCCGAGAAAATCGAACACGAAATGCTTCGACTTGTTGTTGATGGCAGAGAAAGCAATGTCACTTTTGACAATTTCCCTTATTATCTCAGTGAGAAGACACGGGTGTTGCTGACAAGTGCTGCCTATGTCCATTTAAAGCATGCAGAGGTTTCTAAATATACACGGAATCTCGCTCCTGCAAGCCGGACTATTCTGCTCTCAGGGCCAGCCGAACTTTACCAACAGGTGCTTGCTAAGGCTTTAGCTCACTACTTTGAGGCCAAGTTGCTTCTGTTCGATGTAACTGACTTTTCTTTGAAGATTCAAAGTAGATATGGCTCTTCCATCAACGAAACTTCTTTCAAAAGATCTACTTCAGACACAACTTTGGCTCGGCTATCTGACCTATTTGGTTCATTTTCAATCTTTCCACCAAAAGAAGAGATTAAAGTTGCAGGTAGAATGCAAAAGCAAAGGAGTGGCGTAGACCTTAAACGAATGGAGGCGGAAGGATCTCATACTCCTACTAAGCTTCGTAGGAATGCATCAGCCTCTGCAAATATTAGCAGCCTTGGTTCGCAAAGCAATCCTACAAGCTCAGCACCTGGGAAGCACATGGCCAATTGGTCTTTTGATGAAAAGCTTCTTATACAGACTCTTTACAAGGCTCTAGTTTATGTGTCAAAAACCTATCCCATTGTTCTATATCTGCGGGATGTTGATAAGCTGTTGTGTAGATCACAGAGGATATGTAAACTATTCCAGACAATGTTAACGAAATTATCTGGACCAATTTTGATTCTTGGTTCAAGGGTTTTGGATTCTGGTAATGAATGCAAAGAAGTGGATGAGATGCTTAGCCCCCTCTTCCCTTACAACATAGAAATCAGCCCACCAGAAGATGAGTCTCGTCTTGTCAGCTGGAAGTCTCAATTTGAAGAGGATATGAAGAAGATACAGATTCAGGATAACAAGAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGATTGTCATGACCTGGATTCCATCTGTGTGGCAGACACAATGGTTCTCAGTAACTATATAGAAGAGATTGTTGTATCAGCAATTTCTTATCATTTAATGAATAACAAAGAGCCTGATTACAGAAATGGGAAACTGGTTATTCCATGCAATAGCTTGTCCCATGCTCTGGGTATATTCCACGAGGGAAAACTCAGTGGAAGAGATACATTAAAACTAGAAGCTCAAGCAGTAACATCTGAGAGAGAGGAAGCAGCTGTTACGAAACCAGCAGAAAAGTCTGAAAATCCTGCTCCTGGTATAAAAACTGAAAATCCTGCTCCTGGTATAAAAACTGAAAATCCTGCTCCTGGTATAAAGGCTGAAACAGAAATACTAACTTCAGTGGGCAAAACTGATGGTGAAAATTCAGTTCCTGCAACCAAAGCTGAAGCTCCTCCCGATAATGAGTTTGAGAAGCGAATAAGGCCTGAAGTAATACCAGCAAACGAAATTGGGGTAACATTCTCCGACATTGGTGCCTTAGAGGAGACGAAAGAGTCACTTCAAGAACTTGTAATGCTTCCCCTTCGAAGGCCAGACCTTTTTGATGGAGGCCTTTTAAAGCCTTGTAGAGGAATATTGCTATTTGGGCCGCCTGGAACAGGAAAAACAATGCTGGCAAAGGCCATTGCAAATGAGGCTGGAGCAAGTTTCATTAATGTATCCATGTCTACCATCACCTCTAAATGGTTTGGTGAAGACGAGAAAAATGTCCGTGCTTTATTCACACTGGCAGCCAAGGTCTCCCCAACTATTATATTTGTTGATGAGGTGGATAGTATGCTTGGGCAGCGGACAAGGGTCGGGGAACATGAAGCCATGCGGAAAATAAAGAATGAATTTATGACCAATTGGGATGGACTTACCTCAAAACCATCCGATCGCATCCTTGTCCTTGCTGCAACCAATAGGCCCTTTGACTTGGATGAAGCAATTATTAGACGATTTGAAAGGAGGATTATGGTTGCGCTACCATCTGTGGAGAACAGGGAGAATATATTGAGGACCCTTTTGGCTAAAGAGAAAGTGGATGGTGGACTTGATTTTAAGGAACTCGCAACTATGACAGAAGGATTCAGCGGAAGCGATCTAAAGAACTTATGTACAACCGCTGCTTATAGACCTGTTAGAGAGTTAATTCAGCAAGAGATAAAAAAGGATTTGGAAAAAAAGAAGAAAGACGCCGAAGGACAAAATAGCCAAGATGGTCATGATGCAGAGAAGGAAGTTAAACAGGAAAGAGTTATTACCCTTAGGCCTTTGAATATGCAGGACTTCAAAGTGGCAAAGAGTCAGGTTGCCGCAAGCTTTGCAGCCGAAGGGGCTGGAATGAATGACTTGAAGCAGTGGAATGACCTTTATGGGGAAGGTGGTTCAAGGAAGAAAGAGCAATTATCTTATTTCCTATGA 2562 0.4254 MEQKGLLISALSVGVGVGVGLGLASGQTKWGANAFATNAITPEKIEHEMLRLVVDGRESNVTFDNFPYYLSEKTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQVLAKALAHYFEAKLLLFDVTDFSLKIQSRYGSSINETSFKRSTSDTTLARLSDLFGSFSIFPPKEEIKVAGRMQKQRSGVDLKRMEAEGSHTPTKLRRNASASANISSLGSQSNPTSSAPGKHMANWSFDEKLLIQTLYKALVYVSKTYPIVLYLRDVDKLLCRSQRICKLFQTMLTKLSGPILILGSRVLDSGNECKEVDEMLSPLFPYNIEISPPEDESRLVSWKSQFEEDMKKIQIQDNKNHIMEVLAANDLDCHDLDSICVADTMVLSNYIEEIVVSAISYHLMNNKEPDYRNGKLVIPCNSLSHALGIFHEGKLSGRDTLKLEAQAVTSEREEAAVTKPAEKSENPAPGIKTENPAPGIKTENPAPGIKAETEILTSVGKTDGENSVPATKAEAPPDNEFEKRIRPEVIPANEIGVTFSDIGALEETKESLQELVMLPLRRPDLFDGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTNWDGLTSKPSDRILVLAATNRPFDLDEAIIRRFERRIMVALPSVENRENILRTLLAKEKVDGGLDFKELATMTEGFSGSDLKNLCTTAAYRPVRELIQQEIKKDLEKKKKDAEGQNSQDGHDAEKEVKQERVITLRPLNMQDFKVAKSQVAASFAAEGAGMNDLKQWNDLYGEGGSRKKEQLSYFL* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4201 853 Coils Coil 765 785 - -
Psa2g4201 853 CDD AAA 575 708 - -
Psa2g4201 853 ProSitePatterns AAA-protein family signature. 680 699 IPR003960 GO:0005524|GO:0016887
Psa2g4201 853 MobiDBLite consensus disorder prediction 774 796 - -
Psa2g4201 853 MobiDBLite consensus disorder prediction 188 213 - -
Psa2g4201 853 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 853 - -
Psa2g4201 853 MobiDBLite consensus disorder prediction 449 519 - -
Psa2g4201 853 Pfam ATPase family associated with various cellular activities (AAA) 577 706 IPR003959 GO:0005524|GO:0016887
Psa2g4201 853 Gene3D - 709 792 - -
Psa2g4201 853 Gene3D - 536 795 IPR027417 -
Psa2g4201 853 SMART AAA_5 573 710 IPR003593 -
Psa2g4201 853 MobiDBLite consensus disorder prediction 188 209 - -
Psa2g4201 853 Pfam AAA+ lid domain 731 773 IPR041569 -
Psa2g4201 853 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 537 777 IPR027417 -
Psa2g4201 853 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4201 Psa-Chr2 422517216 422523632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4201 537 767 Calmodulin-binding Proteins AT3G56690 37.179 6.50e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4201 - - gmx:100808011 1290.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4201 2 422517216 422523632 Psa2g4201 2 422517216 422523632 ECH