Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4182 ATGGCTTTGAACACTCCAATACGGTCCAACACCACACCCCTCTCCAACTCAATCTTCAAATGTAAACAGATTTTCTTACATGAATGGTGGCTTGTCAAGCCTCAAAACCACTGCAACGGTTTCGCTATTGCTGGCTTTGCTTCAATTGGGAGGGGAGAAAAAGTGTTTGTTTCAACTGTGATTGTAAAGGTACATGAAACCAATGTTGTAGAGACCCAAGATGGCGTCATCGTAGGCTTCCGCGGTTTCATAAACTTCTCTCGTTCCTTCCAAAATGGTTTTTCTTCTCAGATATGCCAACGTTTCTCAATTGGATTTCCACACGATTGGAAAAAATTGTCTGCTCGTTTAGGAAATGAATGTGATTATGTGGATAGGGTTAATGATTTTGATGTTTCAAATACTCCTTGCCACAAAGAAACAATGGATGATACTTCACAAGAAGCTATGGAAGTTGAAGGTAACAAGAATATTACAAGTCTTCGGTTGTCTCAACCACAAGTTGACGTGATTTATAATGGTGAAGATGGGTTCTCAAATGTTGATGACTCAAATGCTTCTCCCTGCCAAAAAACAGCTGATAAAAGTTTGCAGGAAGCGGAAGGTAATGACAATATTGCGAGTCATAAGTTGTCTCATCCACAAGTTGATGTGATTTATAATGGTGAAAATAAAGTCTCAGATTTTGACGACTTGAATGCTTCTTTCCCCAAAAAGACAGCTGACATGACATCACACGAAGCTAAGGAAGCTGACGATGACGACAATGTCGGGAGTCTTAGGATATCTCAGCTGCAGGTTAACATGATTAATACTGGTGAAAATGGAGTTTCAAGTGTTGCTCAAGCCGAAAGTAGTCAATCTAAGATGGGTGTGTTTGAATTTGATCCTGTCTTGGAGCAAAGCAGTGTCAGGTCTCCACTTCACCCAAAGAAATTGAACTTTTACCAGTTATCTAGTGACCCCGAGGAGAACAAACGTCTCAAGCAGAAGATTGTAGAGGATCATGGTAATTTGTGTAGAAGGGTGATGACAAGAAGCATTGCCAAAAAAATGTCACATAATGCTTATAAAGGATGGGAAAGTTGA 1089 0.4013 MALNTPIRSNTTPLSNSIFKCKQIFLHEWWLVKPQNHCNGFAIAGFASIGRGEKVFVSTVIVKVHETNVVETQDGVIVGFRGFINFSRSFQNGFSSQICQRFSIGFPHDWKKLSARLGNECDYVDRVNDFDVSNTPCHKETMDDTSQEAMEVEGNKNITSLRLSQPQVDVIYNGEDGFSNVDDSNASPCQKTADKSLQEAEGNDNIASHKLSHPQVDVIYNGENKVSDFDDLNASFPKKTADMTSHEAKEADDDDNVGSLRISQLQVNMINTGENGVSSVAQAESSQSKMGVFEFDPVLEQSSVRSPLHPKKLNFYQLSSDPEENKRLKQKIVEDHGNLCRRVMTRSIAKKMSHNAYKGWES* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4182 362 Pfam SANTA (SANT Associated) 24 112 IPR015216 -
Psa2g4182 362 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 180 354 - -
Psa2g4182 362 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 9 228 - -
Psa2g4182 362 PANTHER MIS18-BINDING PROTEIN 1 180 354 IPR039110 -
Psa2g4182 362 PANTHER MIS18-BINDING PROTEIN 1 9 228 IPR039110 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa2g4182 SANTA 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4182 - - mtr:MTR_5g040080 348.591