Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4178 ATGATCATATCCGAGAAAAATCGCAGAGAGATCTCCAAATACCTCTTCCAAGAGGGAGTTTGCTATGCAAAGAAGGACTTCAATTTGGCAAAGCACCCTGAGATTGATGTACCAAATCTGCAAGTGATTAAGCTGATGCAGAGTTTCAAATCTAAGGAATATGTGAGGGAGACTTTTGCTTGGATGCATTATTACTGGTTTTTGACTAATGATGGAATCGAGTTCCTCAGGACTTATCTCAATCTTCCATCTGAGATTGTGCCAGCTACTTTGAAGAAGCAGGCTAAGCCAGCTGGTAGACCATTCGGTGGTCCACCTGGTGATCGCCCTAGAGGCCCACCTAGATTTGAGGGAGAAAGGAGATTTGGCGGTGACCGTGATGGGTACCGTGGTGGTCCAGGTCCCAGAGGGCCTGGTGGTGAGTTTGGTGGAGACAAGGGTGGAGCTCCTGCTGATTACAGACCTTCTTTCGGGGGTCCTGGTGGAAGACCTGGCTTTGGTCGTGGTTCTGGTGGCTTTGGAGCACCAACAAGTTCAAACGATGCTTAA 549 0.4827 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGGDRDGYRGGPGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNDA* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4178 182 MobiDBLite consensus disorder prediction 91 182 - -
Psa2g4178 182 PANTHER 40S RIBOSOMAL PROTEIN S10 1 180 IPR037447 -
Psa2g4178 182 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 180 - -
Psa2g4178 182 Gene3D - 1 104 IPR036388 -
Psa2g4178 182 MobiDBLite consensus disorder prediction 112 127 - -
Psa2g4178 182 Pfam Plectin/S10 domain 3 94 IPR005326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4178 Psa-Chr2 421806437 421808392 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4178 1 157 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 80.255 6.78e-73 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4178 K02947 - gmx:100500445 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4178 2 421806437 421808392 Psa2g4178 2 421806437 421808392 ECH
Psa2g4178 2 421806437 421808392 Psa7g0698 7 47702379 47704506 PCT