Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4175 CAAAAGCAAAGATGATAATGATACAGATTCAACTAAGAAGGTTTTCACTCATAAAGGTCGTTACGTCCAATACAGTTTGTATGGAAACTTGTTTGAAGTGTCTTCAAAATATGTTCCTCCACTTCGCCCTATCGGTAGAGGTGCTTATGGCATCGTCTGTGCCGCGGTTAATTCTGATACTCGTGAGGAAGTTGCCATCAAGAAAATTGGAAATACCTTTGATAACATTATTGATGCTAAGAGGACTTTGAGGGAAATCAAGCTTCTTCGTCACATGGATCATGAAAATATTATTGCTATTAAGGATATTATAAGACCTCCACAAAAGGATGCTTTTAATGATGTTTACATTGTTTATGAATTGATGGATACGGATCTTCATCAGATTATTCGTTCGAATCAACCTCTTAATCTCGATCATTGTCAATACTTTCTATACCAGCTATTAAGGGGACTGAAATATGTGCATTCCGCGAATGTCTTGCATCGTGATCTTAAACCGAGCAATTTACTTTTGAATGGAAACTGTGACCTTAAAATTGGGGATTTTGGTTTGGCGAGGACGACATCTGAAACAGATTTTATGACGGAGTATGTCGTTACTAGATGGTATCGAGCCCCGGAGTTGCTCCTTAATTGTTCAGAGTACACATCCGCAATCGATGTTTGGTCGGTTGGTTGTATATTTGCTGAAATCATGACCAGACAGCCTTTGTTTCCTGGGAAAGATTATGTTCATCAATTAAGGCTTATAACTGAGTTAATAGGTTCTCCCGACGAGTCGAGCCTTGGATTTCTCCGAAGTGAAAATGCGAAAAGGTATCTTAGACAGCTTCCACAGTTTGGGAAGCAAGATCTTTCTGCGAAATGTCCTCGTATGTCGGCCGAGCCTCTGGACTTGCTAGAGAAAATGCTTATCTTTGATCCCGACAAACGAATTACAGTTGATGAGGCACTATGTCACCCATATCTATCATCACTTCATGACATCAATGACGAGCCAGTGACTCCCATGCCATTCAGTTTTGATTTTGAGCAGCCATCATGTACCGTAGAGCACATCAAAGAACTCATCTGGAGGGAATCAGTGAGGTTCAACCCGGATCCACTGTCTAAATAG 1120 0.4054 KSKDDNDTDSTKKVFTHKGRYVQYSLYGNLFEVSSKYVPPLRPIGRGAYGIVCAAVNSDTREEVAIKKIGNTFDNIIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQKDAFNDVYIVYELMDTDLHQIIRSNQPLNLDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNGNCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFAEIMTRQPLFPGKDYVHQLRLITELIGSPDESSLGFLRSENAKRYLRQLPQFGKQDLSAKCPRMSAEPLDLLEKMLIFDPDKRITVDEALCHPYLSSLHDINDEPVTPMPFSFDFEQPSCTVEHIKELIWRESVRFNPDPLSK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4175 372 CDD STKc_TEY_MAPK 31 367 - -
Psa2g4175 372 ProSitePatterns MAP kinase signature. 73 176 IPR003527 GO:0004707|GO:0005524|GO:0006468
Psa2g4175 372 SMART serkin_6 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g4175 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 14 370 - -
Psa2g4175 372 Gene3D Phosphorylase Kinase; domain 1 21 361 - -
Psa2g4175 372 Gene3D Transferase(Phosphotransferase) domain 1 122 351 - -
Psa2g4175 372 Pfam Protein kinase domain 42 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g4175 372 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Psa2g4175 372 ProSiteProfiles Protein kinase domain profile. 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g4175 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Psa2g4175 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 370 - -
Psa2g4175 372 SUPERFAMILY Protein kinase-like (PK-like) 41 332 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4175 Psa-Chr2 421779116 421780658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4175 6 367 MAP Kinase Gene Family AT4G01370 81.215 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Psa2g4175 Pkinase 1.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4175 K20600 K04464 gmx:100803024 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4175 2 421779116 421780658 Psa2g4175 2 421779116 421780658 ECH
Psa2g4175 2 421779116 421780658 Psa7g0699 7 47705634 47707571 PCT