Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4155 ATGCATAGAGGAGGAGGGGTTGGTGGAGTGTTCCAACAAACTCCTTCTGGGTTTAGAGCTTTGCCTAGTAATGCTCATGGTGGTTCTGATGGTTCTACATATTCAGTGGAGCCTCAGCATGATAGTTTTAGTCGCGGTGGTGTTAGTAACAGCATAGGTTCATCTCCTGGTGCTTTAGTGCCTTATTCAGGAGAGCAGTCTGTGAAAAAGAAAAGAGGGAGACCTAGGAAGTATGGTCCTGATGTACCTGTTTCTTTGAGACTCTCTTCTCCTATGCCGGCCACTGACAATTCCACATCTCCTTCGGAGAAACGGCCGAGAGGACGTCCACGCGGAAGTGGAAGGAAACAACAACTAGCTGCTCTAGGCGAATGGATGAACAACTCTGCCGGCCAGGCTTTTTCACCACATGTTATCACCATTGGAGTTCAGGAGGACATTGTAGCAAAGTTACTGGCATTTTCACAACACAGACAACGTGCTTTATGCATCATGTCGGGAACCGGGACTGTATCTTCAGTCACTCTGCGCCAGCCTGCTTCTACGACTATCAGCGTTGCATTTGAGGGGCGATTCCAAATATTATGCTTATCTGGCTCTTACTTGGTTGCTGAAGACGGTGGACCTCAAAATAGAACTGGTGGCATTAGTGTTTCCCTTTCTAGTCCGGACGGTCATGTTATTGGCGGCGGTGTTGCGAGGCTTGTTGCTGCAAGCCCTGTCCAGGTGGTTGTTTGCAGTTTCGTATACGGCGGCTCTAAGGCGAAGACAACAAAGCAAGGGGATGGGTCTGAGCCTCAGAGTAGTGACCAGTTAGCTTCTCCAGGAAGTGAACCATCTAATCAAAACTATACAGCTTCTGGAACAGGAACAATGTGGCTTGGATCGAGGCCAGGTGATGTGAAAAGTGAACATCCACACACTGGTATTGACTTGATGCATGGGTGA 948 0.4852 MHRGGGVGGVFQQTPSGFRALPSNAHGGSDGSTYSVEPQHDSFSRGGVSNSIGSSPGALVPYSGEQSVKKKRGRPRKYGPDVPVSLRLSSPMPATDNSTSPSEKRPRGRPRGSGRKQQLAALGEWMNNSAGQAFSPHVITIGVQEDIVAKLLAFSQHRQRALCIMSGTGTVSSVTLRQPASTTISVAFEGRFQILCLSGSYLVAEDGGPQNRTGGISVSLSSPDGHVIGGGVARLVAASPVQVVVCSFVYGGSKAKTTKQGDGSEPQSSDQLASPGSEPSNQNYTASGTGTMWLGSRPGDVKSEHPHTGIDLMHG* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4155 315 ProSiteProfiles PPC domain profile profile. 131 269 IPR005175 -
Psa2g4155 315 MobiDBLite consensus disorder prediction 21 61 - -
Psa2g4155 315 CDD DUF296 136 248 IPR005175 -
Psa2g4155 315 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 8 315 - -
Psa2g4155 315 Gene3D - 136 261 - -
Psa2g4155 315 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 8 315 IPR039605 GO:0003680
Psa2g4155 315 MobiDBLite consensus disorder prediction 21 117 - -
Psa2g4155 315 MobiDBLite consensus disorder prediction 256 289 - -
Psa2g4155 315 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 249 IPR005175 -
Psa2g4155 315 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4155 Psa-Chr2 421435084 421437731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4155 68 315 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 56.318 2.88e-84 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4155 - - cam:101497147 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4155 2 421435084 421437731 Psa2g4155 2 421435084 421437731 ECH