Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4133 ATGGCTCATTTGGTCTATGGTGAAACTCCATCTTTTGGAAACTCGCACCATGGACAAGGTCAACAACATGTTCCATTTCCAACCACATCAAGTTCCTTAAAGATTCTTCTCTTACATGGAAACTTAGAAATTTGCATCCGAGAAGCCAAAAACCTTCCCAACATGGACACTTTTCATAAGACAATGGGAGACATGTTTTCATTCTTACCTACAAAACTTAGTGGTAAAATGTCTCAAAATCTAACCAGTGATCCATATGTTACTGTCTCTATAGCTGGTGCTGTTATTGCAAGTACTTTTATCATTAGAAACAACGAAAACCCGGTTTGGATGCAGCATTTTAATGTTCCTGTTGCACATCTTGCATCAGAAATTCACTTTGTTGTAAAAGACAACGATATCGTTGGTTCACAGGTTATCGGTGCAGTGGGAATTCCGGTTGAGAACCTATGTAATGGCTCCAAACTTGAAGGCATTTTTCCCATTCTTGATACTAATGGAAAGCCCTTTAAGTCAACAGTTTTGAGCTTATCAATTCAGTATACTCCTGTTGATAAGGTAGCCCTTTATAGTAACGGTATCGGTGAGGATTATCAAGGTGTTCCTGCTACGTATTTTCCGCTTAGGAAAGGTGGAAAAGTTACACTTTATCAAGATGCTCATGTTCCACAAGATTCTCTTCCTGGTTTGAAGGTTGATGATGGTGATCAAGTGAGTTGTTATGAGAATGGAAATTGTTGGCATGACATCTTCGATGCGATAAGTCAGGCGCACCGATTGGTCTATATCGTCGGTTGGTCTGTTTACTACAATGTTAGTCTCATTAGAGATACTAGAGATGGAAAAGATCATACTTTAGGTGAACTTCTCAAAGCTAAATCACAAGAAGGTGTGAGAGTGCTTCTACTTGTGTGGGATGATCTTACTTCTAATAGCGTGCTCGGATATAAAACAGTTGGACTTATGAATACCTACGACGAGGAGACTCGACAATATTTCAAGCATTCTTCCGTTAGAGTGCTTCTTTGTCCGAGATCTGGAGGAAAAGGACATAGCTGGGTGAAACAACAGGAAGCTGGAACAATCTATACACATCATCAGAAGACAGTGATTGTGGATGCTGATGCAGGTCAACATAAGAGAAAGATTGTAGCTTTCATTGGAGGGCTTGATTTATGTTTGGGAAGATACGATACGCCGGAACATTCTCTCTTTAGGACTTTGCAGACAACACACAAAGATGATTTTTATAATCATAACTTTGAGGGTTCTGTTACTGGTTGTCCAAGACAACCATGGCATGATTTGCATTCCAAAATTGAAGGTCCTGCTGCATATGACATTCTCACCAATTTCGAGGAACGTTGGTTAAGAGCATTAAAAATGACTACACTTCTAAAGATAAAAGTTTCAAATGATGATTCATTACTGAAAATCGATAGAATCTCCGACATAGTTGGCATTGATGAAGCTCCTTACCTAGATGAACATAACCAAGAAGAGACTTGGCATGTCCAGATCTTCCGTTCGATCGATTCCAATTCTGTCAAAGGATTTCCAAAAGAACCCAAAGAAGCTATACAAAGGAACTTGGTTTGTGGAAAGAATGTAATGATAGACATGAGCATACATTCTGCATATGTCAAAGCAATCAGATCAGCACAGAAGTTCATTTACATCGAGAATCAATATTTTCTCGGCTCATCGTATAATTGGGATTCTTACAAAGACCTCGGTGCAAACAACTTAATTCCAATGGAAATCGCGCTAAAAATAGCGAACAAAATCAAACAGAAAGAGAGATTCTCTGTGTATATTGTGATTCCTATGTGGCCTGAAGGTGTACCTTCAAGTATAGCTACTCAGAGGATTCTCTTTTGGCAGTTCAAAACAATGCAAATGATGTATGCAACAATTTACAAGGCCTTAGAGGAAGCTGGACTCGAAAATCAGTACGAACCGCAGGACTACTTGAACTTCTTTTGCCTTGGCAATCGCGAGCTCTCCGATAACGAAAGCATTTCAAATCCTATAAAACCGACCGGACAAAACGCTCCGCAGGTACTATCTCAAAAGAATAGAAGATTCATGATTTATGTTCATTCAAAAGGAATAATAGTGGATGATGAATATGTGTTAATGGGATCTGCCAACATAAACCAGAGATCCATGGAAGGCACTAGAGACACTGAGATTGCAATGGGAGCATATCAGCCTAATCATACTTGGGCAACAAGCAAATCCAAACCTCATGGCCAGGTGCATGGTTATAGGATGTCATTGTGGAGTGAGCACATAGGAGGTGTGGAAGAGTGTTTCAAGGAACCAGAGAGTGTTGAATGTGTGAGAAGGATCAGAGGTTTGAGTGAGTATAATTGGAAACAATATGTGGCTGATGAAGTAACTGAAATGAAAAGTCATTTACTGAAATACCCTCTTGAGGTTGACTCAAAGGGCAATGTGAAACCTATTGTTGGGTGTGAAACATTCCCTGATGTTGGTGGGAGCATAAAGGGAACCTTTGTTGTACTTCAAGAAAATCTCACTATATAA 2553 0.3956 MAHLVYGETPSFGNSHHGQGQQHVPFPTTSSSLKILLLHGNLEICIREAKNLPNMDTFHKTMGDMFSFLPTKLSGKMSQNLTSDPYVTVSIAGAVIASTFIIRNNENPVWMQHFNVPVAHLASEIHFVVKDNDIVGSQVIGAVGIPVENLCNGSKLEGIFPILDTNGKPFKSTVLSLSIQYTPVDKVALYSNGIGEDYQGVPATYFPLRKGGKVTLYQDAHVPQDSLPGLKVDDGDQVSCYENGNCWHDIFDAISQAHRLVYIVGWSVYYNVSLIRDTRDGKDHTLGELLKAKSQEGVRVLLLVWDDLTSNSVLGYKTVGLMNTYDEETRQYFKHSSVRVLLCPRSGGKGHSWVKQQEAGTIYTHHQKTVIVDADAGQHKRKIVAFIGGLDLCLGRYDTPEHSLFRTLQTTHKDDFYNHNFEGSVTGCPRQPWHDLHSKIEGPAAYDILTNFEERWLRALKMTTLLKIKVSNDDSLLKIDRISDIVGIDEAPYLDEHNQEETWHVQIFRSIDSNSVKGFPKEPKEAIQRNLVCGKNVMIDMSIHSAYVKAIRSAQKFIYIENQYFLGSSYNWDSYKDLGANNLIPMEIALKIANKIKQKERFSVYIVIPMWPEGVPSSIATQRILFWQFKTMQMMYATIYKALEEAGLENQYEPQDYLNFFCLGNRELSDNESISNPIKPTGQNAPQVLSQKNRRFMIYVHSKGIIVDDEYVLMGSANINQRSMEGTRDTEIAMGAYQPNHTWATSKSKPHGQVHGYRMSLWSEHIGGVEECFKEPESVECVRRIRGLSEYNWKQYVADEVTEMKSHLLKYPLEVDSKGNVKPIVGCETFPDVGGSIKGTFVVLQENLTI* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4133 850 PIRSF PLD_plant 27 850 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Psa2g4133 850 Pfam Phospholipase D C terminal 770 840 IPR024632 -
Psa2g4133 850 SMART pld_4 361 396 IPR001736 GO:0003824
Psa2g4133 850 SMART pld_4 696 723 IPR001736 GO:0003824
Psa2g4133 850 Gene3D C2 domain 35 177 IPR035892 -
Psa2g4133 850 CDD C2_plant_PLD 36 182 - -
Psa2g4133 850 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 696 723 IPR001736 GO:0003824
Psa2g4133 850 PANTHER PHOSPHOLIPASE D 8 850 IPR015679 -
Psa2g4133 850 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 8 850 - -
Psa2g4133 850 Pfam Phospholipase D Active site motif 362 396 IPR001736 GO:0003824
Psa2g4133 850 Pfam Phospholipase D Active site motif 697 723 IPR001736 GO:0003824
Psa2g4133 850 Gene3D Endonuclease Chain A 504 751 - -
Psa2g4133 850 ProSiteProfiles C2 domain profile. 21 160 IPR000008 -
Psa2g4133 850 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 184 IPR035892 -
Psa2g4133 850 Pfam C2 domain 40 162 IPR000008 -
Psa2g4133 850 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 361 396 IPR001736 GO:0003824
Psa2g4133 850 SMART C2_3c 41 159 IPR000008 -
Psa2g4133 850 SUPERFAMILY Phospholipase D/nuclease 198 462 - -
Psa2g4133 850 Gene3D Endonuclease Chain A 232 478 - -
Psa2g4133 850 SUPERFAMILY Phospholipase D/nuclease 543 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4133 Psa-Chr2 420328730 420332865 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4133 32 850 Phospholipase D Gene Family (Wang group) AT2G42010 66.863 0.0 1216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4133 K01115 - gmx:100786241 1432.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4133 2 420328730 420332865 Psa2g4133 2 420328730 420332865 ECH