Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g4133 | ATGGCTCATTTGGTCTATGGTGAAACTCCATCTTTTGGAAACTCGCACCATGGACAAGGTCAACAACATGTTCCATTTCCAACCACATCAAGTTCCTTAAAGATTCTTCTCTTACATGGAAACTTAGAAATTTGCATCCGAGAAGCCAAAAACCTTCCCAACATGGACACTTTTCATAAGACAATGGGAGACATGTTTTCATTCTTACCTACAAAACTTAGTGGTAAAATGTCTCAAAATCTAACCAGTGATCCATATGTTACTGTCTCTATAGCTGGTGCTGTTATTGCAAGTACTTTTATCATTAGAAACAACGAAAACCCGGTTTGGATGCAGCATTTTAATGTTCCTGTTGCACATCTTGCATCAGAAATTCACTTTGTTGTAAAAGACAACGATATCGTTGGTTCACAGGTTATCGGTGCAGTGGGAATTCCGGTTGAGAACCTATGTAATGGCTCCAAACTTGAAGGCATTTTTCCCATTCTTGATACTAATGGAAAGCCCTTTAAGTCAACAGTTTTGAGCTTATCAATTCAGTATACTCCTGTTGATAAGGTAGCCCTTTATAGTAACGGTATCGGTGAGGATTATCAAGGTGTTCCTGCTACGTATTTTCCGCTTAGGAAAGGTGGAAAAGTTACACTTTATCAAGATGCTCATGTTCCACAAGATTCTCTTCCTGGTTTGAAGGTTGATGATGGTGATCAAGTGAGTTGTTATGAGAATGGAAATTGTTGGCATGACATCTTCGATGCGATAAGTCAGGCGCACCGATTGGTCTATATCGTCGGTTGGTCTGTTTACTACAATGTTAGTCTCATTAGAGATACTAGAGATGGAAAAGATCATACTTTAGGTGAACTTCTCAAAGCTAAATCACAAGAAGGTGTGAGAGTGCTTCTACTTGTGTGGGATGATCTTACTTCTAATAGCGTGCTCGGATATAAAACAGTTGGACTTATGAATACCTACGACGAGGAGACTCGACAATATTTCAAGCATTCTTCCGTTAGAGTGCTTCTTTGTCCGAGATCTGGAGGAAAAGGACATAGCTGGGTGAAACAACAGGAAGCTGGAACAATCTATACACATCATCAGAAGACAGTGATTGTGGATGCTGATGCAGGTCAACATAAGAGAAAGATTGTAGCTTTCATTGGAGGGCTTGATTTATGTTTGGGAAGATACGATACGCCGGAACATTCTCTCTTTAGGACTTTGCAGACAACACACAAAGATGATTTTTATAATCATAACTTTGAGGGTTCTGTTACTGGTTGTCCAAGACAACCATGGCATGATTTGCATTCCAAAATTGAAGGTCCTGCTGCATATGACATTCTCACCAATTTCGAGGAACGTTGGTTAAGAGCATTAAAAATGACTACACTTCTAAAGATAAAAGTTTCAAATGATGATTCATTACTGAAAATCGATAGAATCTCCGACATAGTTGGCATTGATGAAGCTCCTTACCTAGATGAACATAACCAAGAAGAGACTTGGCATGTCCAGATCTTCCGTTCGATCGATTCCAATTCTGTCAAAGGATTTCCAAAAGAACCCAAAGAAGCTATACAAAGGAACTTGGTTTGTGGAAAGAATGTAATGATAGACATGAGCATACATTCTGCATATGTCAAAGCAATCAGATCAGCACAGAAGTTCATTTACATCGAGAATCAATATTTTCTCGGCTCATCGTATAATTGGGATTCTTACAAAGACCTCGGTGCAAACAACTTAATTCCAATGGAAATCGCGCTAAAAATAGCGAACAAAATCAAACAGAAAGAGAGATTCTCTGTGTATATTGTGATTCCTATGTGGCCTGAAGGTGTACCTTCAAGTATAGCTACTCAGAGGATTCTCTTTTGGCAGTTCAAAACAATGCAAATGATGTATGCAACAATTTACAAGGCCTTAGAGGAAGCTGGACTCGAAAATCAGTACGAACCGCAGGACTACTTGAACTTCTTTTGCCTTGGCAATCGCGAGCTCTCCGATAACGAAAGCATTTCAAATCCTATAAAACCGACCGGACAAAACGCTCCGCAGGTACTATCTCAAAAGAATAGAAGATTCATGATTTATGTTCATTCAAAAGGAATAATAGTGGATGATGAATATGTGTTAATGGGATCTGCCAACATAAACCAGAGATCCATGGAAGGCACTAGAGACACTGAGATTGCAATGGGAGCATATCAGCCTAATCATACTTGGGCAACAAGCAAATCCAAACCTCATGGCCAGGTGCATGGTTATAGGATGTCATTGTGGAGTGAGCACATAGGAGGTGTGGAAGAGTGTTTCAAGGAACCAGAGAGTGTTGAATGTGTGAGAAGGATCAGAGGTTTGAGTGAGTATAATTGGAAACAATATGTGGCTGATGAAGTAACTGAAATGAAAAGTCATTTACTGAAATACCCTCTTGAGGTTGACTCAAAGGGCAATGTGAAACCTATTGTTGGGTGTGAAACATTCCCTGATGTTGGTGGGAGCATAAAGGGAACCTTTGTTGTACTTCAAGAAAATCTCACTATATAA | 2553 | 0.3956 | MAHLVYGETPSFGNSHHGQGQQHVPFPTTSSSLKILLLHGNLEICIREAKNLPNMDTFHKTMGDMFSFLPTKLSGKMSQNLTSDPYVTVSIAGAVIASTFIIRNNENPVWMQHFNVPVAHLASEIHFVVKDNDIVGSQVIGAVGIPVENLCNGSKLEGIFPILDTNGKPFKSTVLSLSIQYTPVDKVALYSNGIGEDYQGVPATYFPLRKGGKVTLYQDAHVPQDSLPGLKVDDGDQVSCYENGNCWHDIFDAISQAHRLVYIVGWSVYYNVSLIRDTRDGKDHTLGELLKAKSQEGVRVLLLVWDDLTSNSVLGYKTVGLMNTYDEETRQYFKHSSVRVLLCPRSGGKGHSWVKQQEAGTIYTHHQKTVIVDADAGQHKRKIVAFIGGLDLCLGRYDTPEHSLFRTLQTTHKDDFYNHNFEGSVTGCPRQPWHDLHSKIEGPAAYDILTNFEERWLRALKMTTLLKIKVSNDDSLLKIDRISDIVGIDEAPYLDEHNQEETWHVQIFRSIDSNSVKGFPKEPKEAIQRNLVCGKNVMIDMSIHSAYVKAIRSAQKFIYIENQYFLGSSYNWDSYKDLGANNLIPMEIALKIANKIKQKERFSVYIVIPMWPEGVPSSIATQRILFWQFKTMQMMYATIYKALEEAGLENQYEPQDYLNFFCLGNRELSDNESISNPIKPTGQNAPQVLSQKNRRFMIYVHSKGIIVDDEYVLMGSANINQRSMEGTRDTEIAMGAYQPNHTWATSKSKPHGQVHGYRMSLWSEHIGGVEECFKEPESVECVRRIRGLSEYNWKQYVADEVTEMKSHLLKYPLEVDSKGNVKPIVGCETFPDVGGSIKGTFVVLQENLTI* | 851 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g4133 | 850 | PIRSF | PLD_plant | 27 | 850 | IPR011402 | GO:0004630|GO:0005509|GO:0016020|GO:0046470 | |
Psa2g4133 | 850 | Pfam | Phospholipase D C terminal | 770 | 840 | IPR024632 | - | |
Psa2g4133 | 850 | SMART | pld_4 | 361 | 396 | IPR001736 | GO:0003824 | |
Psa2g4133 | 850 | SMART | pld_4 | 696 | 723 | IPR001736 | GO:0003824 | |
Psa2g4133 | 850 | Gene3D | C2 domain | 35 | 177 | IPR035892 | - | |
Psa2g4133 | 850 | CDD | C2_plant_PLD | 36 | 182 | - | - | |
Psa2g4133 | 850 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 696 | 723 | IPR001736 | GO:0003824 | |
Psa2g4133 | 850 | PANTHER | PHOSPHOLIPASE D | 8 | 850 | IPR015679 | - | |
Psa2g4133 | 850 | PANTHER | PHOSPHOLIPASE D BETA 1-LIKE | 8 | 850 | - | - | |
Psa2g4133 | 850 | Pfam | Phospholipase D Active site motif | 362 | 396 | IPR001736 | GO:0003824 | |
Psa2g4133 | 850 | Pfam | Phospholipase D Active site motif | 697 | 723 | IPR001736 | GO:0003824 | |
Psa2g4133 | 850 | Gene3D | Endonuclease Chain A | 504 | 751 | - | - | |
Psa2g4133 | 850 | ProSiteProfiles | C2 domain profile. | 21 | 160 | IPR000008 | - | |
Psa2g4133 | 850 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 38 | 184 | IPR035892 | - | |
Psa2g4133 | 850 | Pfam | C2 domain | 40 | 162 | IPR000008 | - | |
Psa2g4133 | 850 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 361 | 396 | IPR001736 | GO:0003824 | |
Psa2g4133 | 850 | SMART | C2_3c | 41 | 159 | IPR000008 | - | |
Psa2g4133 | 850 | SUPERFAMILY | Phospholipase D/nuclease | 198 | 462 | - | - | |
Psa2g4133 | 850 | Gene3D | Endonuclease Chain A | 232 | 478 | - | - | |
Psa2g4133 | 850 | SUPERFAMILY | Phospholipase D/nuclease | 543 | 779 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g4133 | Psa-Chr2 | 420328730 | 420332865 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g4133 | 32 | 850 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 66.863 | 0.0 | 1216 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g4133 | K01115 | - | gmx:100786241 | 1432.93 |