Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4072 ATGAACAATTTCTCACACGTTCCTCCTGGATTCCGTTTCCATCCGACGGATGAAGAACTTGTTGATCACTACCTTAGAAAAAAAATAGCTTCAAAAAGAATTGATCTTGATATCATTAAAGATGTTGATCTCTATAAAATTGAGCCATGGGATCTACAAGAGTTATGTAAAATAGGAAGTGATGAAGAAACTGAATGGTTTTTCTTCAGTCATAAAGACAAGAAATATCCAACTAGTAGTCGTACAAATAGAGCTACAAAAGCAGGATTCTGGAAAGCTACTGGAAGAGACAAAGCAATATATTCTAACAATATTTGTCTGATTGGAATGAGAAAGACTCTAGTTTTCTATAAAGGAAGAGCTCCTAATGGACAGAAATCTGATTGGATCATGCATGAATATCGCTTAGAAACTAATGAAAATGGAACCACACCTCAGGAAGAAGGATGGGCTGTGTGTAAAGTGTTCAAGAAAAGAATAGCTACAACAATGAGGAGAATGGATGAGTCACCATGTGGATATGATGATCAAGTATCATTCATGCAAGAGCTTGAAACACCAAACCGAGTATTTTCTTCTCATTCTTATGCATCATACCAACAACAACAACAACAACAACACTATCCTTGCAAACAAGAGTTGAATCAAATGCAATACAATATATCCATCAATGATGCTAACAATTTCCTCCAACTTCCACCACTAGAAAGCCCTAAAATTCCTAATTTGCAGTGCTCATCATCATCACATTCAATAACTCATCAAGAACAACAATACTATAGCCAGCACCACCAGCAACATAGTATGCAAATGCTTTACGGTGGTAGCAATGATTTACAAGCAGTAGTGGAGCAATCAAAGGATTGGAGAGTATTTGACAAACATGTTGCTTCTCAGCTAAGTCATGATCAAGAACATTCCAAGGAAACAGTAACCAGTTATTGCAATATTGTGGCTGAACAAATTGCTTTGTTAGCAAGTGAATCTAAAAAATCTGAAACTCATGAGCAGGAATATGCTACTTCAACTTCCAACTCCAGTTGCCAGATTGATACATGGAAGTGA 1065 0.3653 MNNFSHVPPGFRFHPTDEELVDHYLRKKIASKRIDLDIIKDVDLYKIEPWDLQELCKIGSDEETEWFFFSHKDKKYPTSSRTNRATKAGFWKATGRDKAIYSNNICLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTTPQEEGWAVCKVFKKRIATTMRRMDESPCGYDDQVSFMQELETPNRVFSSHSYASYQQQQQQQHYPCKQELNQMQYNISINDANNFLQLPPLESPKIPNLQCSSSSHSITHQEQQYYSQHHQQHSMQMLYGGSNDLQAVVEQSKDWRVFDKHVASQLSHDQEHSKETVTSYCNIVAEQIALLASESKKSETHEQEYATSTSNSSCQIDTWK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4072 354 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Psa2g4072 354 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 334 - -
Psa2g4072 354 MobiDBLite consensus disorder prediction 335 354 - -
Psa2g4072 354 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Psa2g4072 354 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Psa2g4072 354 PANTHER OS02G0643600 PROTEIN 4 334 - -
Psa2g4072 354 MobiDBLite consensus disorder prediction 338 354 - -
Psa2g4072 354 Pfam No apical meristem (NAM) protein 8 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4072 Psa-Chr2 418417175 418420027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4072 1 351 NAC Transcription Factor Family AT1G62700 52.580 6.85e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa2g4072 NAM 9.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4072 - - gmx:100783529 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4072 2 418417175 418420027 Psa2g4072 2 418417175 418420027 ECH
Psa2g4072 2 418417175 418420027 Psa4g1619 4 113445518 113450081 PCT