Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4059 ATGGCTAACTCTACTCTTTTACATTCGTTGCAATTTCTTTTGATTTTCAGTTGCATGTTGTTAAATGCAGGAACCTTGTCAAATGGTGCACGATATCACGACACAACCTTCAACTCTTCATCTTCTTCAAACTCATCCAACGATAACCACCACTGGACCGGACCTGTTGGTCACCTTGTAATAACGGTTGATCTCAACGGCGGAGGCCAGTTCAGTTCCGTCCAAGACGCCGTCAATGCTGTCCCAGACAACAACACAATGAAAGTGCTTATTAAAATCAGTGCAGGAAAATACAAAGAGAAAGTGGTGGTTCCCGTGACGAAACCGTACATAACATTTGAAGGTGAAGGGAGAGAAGTGACCGTGATAGAATGGCATGATAGGGCGAGTGATCCTGGTCCCAATGGACAACAGCTACGGACTTATAGAACTGCTTCTGTTACTGTTTTCGCTAATTATTTCTCTGCAAAAAATATCACCTTCAAGAACACAGCACCGGCACCGATGCCGGGGATGCAGGGATGGCAAGCGGTGGCGTTTCGGATATCAGGCGACAAAGCGTACTTCTCCGGCTGTGGATTCTACGGTGCACAAGATACACTTTGCGATGATGCTGGTAGGCATTACTTCAAAGAATGCTACATTGAAGGTTCCATTGATTTCATTTTCGGAAATGGCAGATCCATCTACAAGGATTGTGAGCTACATTCAATAGCATCAAGGTTCGGTTCCATAGCAGCACAGGATAGAAATGACCCAACGGAGAAAACGGGCTTTGCATTTGTACGATGCAAGGTGACGGGCTCAGGCCCATTATATGTGGGCCGTGCAATGGGCCAATACTCGAGAATAGTATACGCGTACACATACTTTGATAATATAGTTGCAAACGGTGGTTGGGATGATTGGGATCATGCCGATAACAAAAACAAGACTGTGTTCTTTGGAGTGTACAAATGTTGGGGACCAGGAGCAGATGCAGTACGTGGGGTGTCATGGGCCCAAGAGTTGGATTTCGATTCTGCACATCCATTTATCAGAAAAAGCTTTGTCAATGGAAGACATTGGATCGCACCCAATGATGCTTAG 1089 0.4536 MANSTLLHSLQFLLIFSCMLLNAGTLSNGARYHDTTFNSSSSSNSSNDNHHWTGPVGHLVITVDLNGGGQFSSVQDAVNAVPDNNTMKVLIKISAGKYKEKVVVPVTKPYITFEGEGREVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSAKNITFKNTAPAPMPGMQGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSIYKDCELHSIASRFGSIAAQDRNDPTEKTGFAFVRCKVTGSGPLYVGRAMGQYSRIVYAYTYFDNIVANGGWDDWDHADNKNKTVFFGVYKCWGPGADAVRGVSWAQELDFDSAHPFIRKSFVNGRHWIAPNDA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4059 362 Pfam Pectinesterase 61 353 IPR000070 GO:0030599|GO:0042545
Psa2g4059 362 SUPERFAMILY Pectin lyase-like 58 359 IPR011050 -
Psa2g4059 362 PANTHER PECTINESTERASE 12 362 - -
Psa2g4059 362 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 12 362 - -
Psa2g4059 362 ProSitePatterns Pectinesterase signature 2. 215 224 IPR033131 -
Psa2g4059 362 Gene3D - 58 361 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4059 Psa-Chr2 417712497 417714880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4059 4 362 Carbohydrate Esterase AT5G47500 71.816 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4059 - - cam:101501763 657.907