Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4053 ATGGGGGTGGTGGAAGATGTAACATTGATTGGAGGGTTGATAGGAGTTCAATTTATCTATGCAGGAAATGCTGAGTTGATGAGTTATTCAATGTCATTAGGAATTAGCCCTCTCACCATTGTTGTTTTCACTTCCATTGCTACATTTCTCATTCTTTTTCCTGCTGCATTTTGTTTTGAAAGGAGTAAGTGGCCCAAGCATTTCAGTTTAAGGTTTATGATGCAGATATGGTTTCTTTCCTTTGGAGGATTAGCTTTCCAAACTTTATTCTTGAAGGGAATCAATCTAACTTCGCCAGCAATGGGAACTGCTATGCCAAACCTTGCACCGGCTCTTATTTTCATCATCGCATGGACTTTTGGGTTAGAGAAAGTTAACTTAAGCAAAAAGTATAGTAAATTAAAAATCTTAGGAACATTGCTATGTGTGTTGGGAGCTCTTACAATGAGCATAATGCAAAGCATTTATGCTCCTCCTGCAACCGCAAAAGAGACTACAATTCTTCAATCATCATCTACACCACCAAATCTTCTCTTTGACATGAAAAAGATAACTGGTTGCTTCTATCTAATGATTTCAGTTTTAATATTGTCAAGCAGTGTTGTCCTACAGGCTTTTGCTCTTGGAGATTTTCCAGCACCAATGTCATTGAGCGCGATAACATCGTTGTTTGGAGGATTCATGACTGCAGTTGTTCAAAAACTCCAAGGTGACGACCTTAAATCTGGTTTGCAACTTGTGAGTTTTGGAGATATTATAGGCTTTTCCATTCTGGCTGGTGGAGTGAGTGGAATAAGCCTAAGCTTCAATGGATGGGCACTTAAGAAGAGAGGACCAGTTTTCGTCTCCATGTTTAGCCCAATTGGAACAGTATGCTCAGTTATTTTCTCAGTCTTTACTGTTGGAGACACTGTTAATATTGGAAGCATTGGTGGCATGTTCCTTATGTTCAGTGGACTTTACATGGTTCTTTGGGCCAAAGGGAAAGAAGGATATGCAGATCGTGGTGAAGATTTCTTAGAGAAAGCTTGA 1032 0.3944 MGVVEDVTLIGGLIGVQFIYAGNAELMSYSMSLGISPLTIVVFTSIATFLILFPAAFCFERSKWPKHFSLRFMMQIWFLSFGGLAFQTLFLKGINLTSPAMGTAMPNLAPALIFIIAWTFGLEKVNLSKKYSKLKILGTLLCVLGALTMSIMQSIYAPPATAKETTILQSSSTPPNLLFDMKKITGCFYLMISVLILSSSVVLQAFALGDFPAPMSLSAITSLFGGFMTAVVQKLQGDDLKSGLQLVSFGDIIGFSILAGGVSGISLSFNGWALKKRGPVFVSMFSPIGTVCSVIFSVFTVGDTVNIGSIGGMFLMFSGLYMVLWAKGKEGYADRGEDFLEKA* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4053 343 Pfam EamA-like transporter family 15 150 IPR000620 GO:0016020|GO:0016021
Psa2g4053 343 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020|GO:0016021
Psa2g4053 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 328 - -
Psa2g4053 343 PANTHER WAT1-RELATED PROTEIN 9 342 IPR030184 GO:0016021|GO:0022857
Psa2g4053 343 PANTHER WAT1-RELATED PROTEIN 9 342 - -
Psa2g4053 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4053 Psa-Chr2 417384694 417387208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4053 4 334 Nodulin-like Gene Family AT5G47470 57.357 2.29e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4053 - - aprc:113870214 473.011