LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa2g4035	ATGGCTTCCTCTACCCTTTACATGATTTTCATTCTCTTTCTTCAACTTATGTTACTCCATGGAGACATTGCTCCAATCTCAACACTCACCGCCACCATCACCAACAATAATAATTCATGGCTATCACCTTCTGGTGAATTCGCCTTCGGATTTCGCCAACTTAACACCTCAACAAACCCTTTCATGCTTGCAATATGGTACAACAAAATACCTGATGAAACCATTGTTTGGACTGCAAGAGACACAAACAACAACAACAATCTCTTACAAGCACCAACTGGATCAAAGATTCAGTTAACATCAGGAGGACTTACTTTGACAACTCCACAAGATGCAATCATTTGGACAGCACGGCCAAACGCTGTTGTTTCCTATGGAAACATGCTTGACACTGGAAACTTTGTTCTTGTAAACAACAATTCAACTGTTTGGGAAAGTTTCGAGTTTCCTACGGATACCCTTTTGCCTAATCAATCTCTTGGGTTAAGTAACACTTTAACTTCCAGATTCTCAGAGAACAACTTTACAAGTGGGAGGTTCCAGCTTTATTTTAATGATGCTGATAAAAATCTCATGTTAAGTCCACTTGCATGGCCTACTCAATTACGTTACGAATCTTATTATACAATCGATGTTCCTAACTCGGCTTCTTCGAGTTTGGTTTTTAATGAATCAGGAGATGTTTATGTGGAAACAAATAATGGGACTAGAATGAAACCACAGAGTGCACAGTGGGGAAATTTGGATTCTGATCCTAAGTTGTATTATTATAGAGCAACACTTGATTATTATGGAGTTTTCACTCAATATTCTCATCCAAGAAACACAAAGGCAAAGCAAGGATGGACTATTGTGAGGTATGTTCCGGAGAACATTTGCAATGGTGTGACCAATGAAATGGGTGGTGGTTCTTGTGGCTATAATAGCTATTGCTCCATGGACAATCAGAGACCTACTTGTAAATGTCCTTATGGTTACTCACTGATAGATCCGAGTAATCGATTTGGCGGGTGTCAACTGAACTTCACACTTGGTTGTGGAGCTGATAATGGTGAAGGATTGAATGTGAAGCAGGAAGATTTATATGAGTTTACTGAACTTAGAGGTGTAAATTGGCCTTTATCAGATTATGAAAAGCTGCAACCATATTCTCAACAGGAGTGTCAACAATCTTGTTTGCATGATTGTATGTGTGATGTTGCTGTTTTCAATGACCAAACTTGTTGGAAGAAAAAATCGCCTCTTGTCAATGGAAGGGAAGAAAATGGTGGCCATATAGTACTTATCAAAACAAGAGTTTCTCCTCTTGGTAAAATAGGTACTTCTCCTTCCACTGACTCGAAAAAAGACGATGTTAAGCCGATGCTTCGAGGACTACTTATTGGTTCGGCTGTCTTCAATAGCATACTCTTGGCTGTGATTGTCTTTGTGATTTTGTTGAAGCCGAAAAGGGTTGTTGTCCAAGGTGCAACTCTCTTGGAAACAAACTTATGTTCCGTTAGTTATGAAGTGTTAAAGGAAGCTACACAGGGTTTTAGTGAAGAACTAGGTAGAGGTTCCTTTGGAATTGTTTACAAAGGTGAGTTAAAAGAAGCAGCATCTTGTAATGTTGTTGCTGTTAAGAGATTGGATCGGTTAGCGCAAGACCGCGATAAGGAATTCAAGACCGAGTTGAGTGCCATTGGTAAAACCTGCCACAAAAACTTGGTAAGGTTGATTGGATTTTGTGATGAGGGAATCCATAGAATGTTGGTGTATGAGTACATGAGCAATGGCAGTCTTGCAGATATCTTGTTTGGACAAACCAAACCCATGTGGAATCAAAGGCTTGAATTTGCTTTGGGGATTGCTAGAGGGATGGTGTATTTACATGAAGAGTGTGACACTCCCATCATTCACTGTGACATAAAGCCTCAAAATATACTCATCGATGAGTACTTTACAGCTAAGATATCTGATTTTGGACTAGCCAAGTTGTTGTTGGCTGATCAGAGTAGAACGAGTACGATGATCCGGGGAACGCGAGGATATGTGGCTCCTGAATGGTTCAAGAATGTTCCTGTGACAGCTAAAGTGGATGTTTACAGCTTTGGCGCCATGTTGTTGGAAATTATTTGCTGCAGAAAAGGTGTGGTGCTGATGGAGTCAGGGGAGGAAGAGAAGACAATTTTGGCAGATTGGGCTTGTAATTGCTATATGGAAGGGAGAATAGATGCTCTTGTGGAGAATGATCATGAGGCCATGAATGACATTGGAAGGTTAGAAAAGTGGATAAAGATAGCAATTTGGTGCATTCTTGAGCATCCTGAAACAAGGCCAACGATGAGGATGGTCGTGCAAATGCTAGAAGGTGTTGTTCAAGTCCCTAACCCACCATCGCCTTTCTCCTTCAGTTCAATTCCTTGA	2406	0.4052	MASSTLYMIFILFLQLMLLHGDIAPISTLTATITNNNNSWLSPSGEFAFGFRQLNTSTNPFMLAIWYNKIPDETIVWTARDTNNNNNLLQAPTGSKIQLTSGGLTLTTPQDAIIWTARPNAVVSYGNMLDTGNFVLVNNNSTVWESFEFPTDTLLPNQSLGLSNTLTSRFSENNFTSGRFQLYFNDADKNLMLSPLAWPTQLRYESYYTIDVPNSASSSLVFNESGDVYVETNNGTRMKPQSAQWGNLDSDPKLYYYRATLDYYGVFTQYSHPRNTKAKQGWTIVRYVPENICNGVTNEMGGGSCGYNSYCSMDNQRPTCKCPYGYSLIDPSNRFGGCQLNFTLGCGADNGEGLNVKQEDLYEFTELRGVNWPLSDYEKLQPYSQQECQQSCLHDCMCDVAVFNDQTCWKKKSPLVNGREENGGHIVLIKTRVSPLGKIGTSPSTDSKKDDVKPMLRGLLIGSAVFNSILLAVIVFVILLKPKRVVVQGATLLETNLCSVSYEVLKEATQGFSEELGRGSFGIVYKGELKEAASCNVVAVKRLDRLAQDRDKEFKTELSAIGKTCHKNLVRLIGFCDEGIHRMLVYEYMSNGSLADILFGQTKPMWNQRLEFALGIARGMVYLHEECDTPIIHCDIKPQNILIDEYFTAKISDFGLAKLLLADQSRTSTMIRGTRGYVAPEWFKNVPVTAKVDVYSFGAMLLEIICCRKGVVLMESGEEEKTILADWACNCYMEGRIDALVENDHEAMNDIGRLEKWIKIAIWCILEHPETRPTMRMVVQMLEGVVQVPNPPSPFSFSSIP*	802

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa2g4035	801	Pfam	D-mannose binding lectin	74	165	IPR001480	-
	Psa2g4035	801	PANTHER	MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN	8	799	-	-
	Psa2g4035	801	Gene3D	-	28	148	IPR036426	-
	Psa2g4035	801	Pfam	Protein kinase domain	513	780	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Psa2g4035	801	Pfam	PAN-like domain	363	417	IPR003609	-
	Psa2g4035	801	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	631	643	IPR008271	GO:0004672\|GO:0006468
	Psa2g4035	801	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	8	799	-	-
	Psa2g4035	801	CDD	STKc_IRAK	516	784	-	-
	Psa2g4035	801	ProSitePatterns	Protein kinases ATP-binding region signature.	516	541	IPR017441	GO:0005524
	Psa2g4035	801	SMART	serkin_6	512	782	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Psa2g4035	801	ProSiteProfiles	Protein kinase domain profile.	510	786	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Psa2g4035	801	PIRSF	SRK	1	800	IPR024171	GO:0004674
	Psa2g4035	801	SUPERFAMILY	Protein kinase-like (PK-like)	495	783	IPR011009	-
	Psa2g4035	801	Gene3D	Phosphorylase Kinase; domain 1	479	588	-	-
	Psa2g4035	801	SUPERFAMILY	alpha-D-mannose-specific plant lectins	61	200	IPR036426	-
	Psa2g4035	801	Gene3D	Transferase(Phosphotransferase) domain 1	589	790	-	-
	Psa2g4035	801	SMART	blect_4	31	150	IPR001480	-
	Psa2g4035	801	ProSiteProfiles	Bulb-type lectin domain profile.	26	149	IPR001480	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa2g4035	Psa-Chr2	416809140	416811545	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa2g4035	447	787	Receptor kinase-like Gene Family	AT5G45780	39.093	3.83e-66	228

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Psa2g4035		Pkinase	6.4e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa2g4035	-		-	gmx:100775269	1024.62