Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3996 ATGGAGGAAGAACGTTACGAAATATTGAAGGATCTTGGTTCAGGGAACTTTGGTGTGGCTAAGTTGGCCAAACACATCAACACTGGAGAGCTTGTGGCTATCAAATACATTGAAAGAGGATATAAGATTAATGAGAATGTTCAAAGGGAAATAATTAACCATCAATGCTTAAAGCATCCAAATATCATCAAGTTCAAAGAGGTATTTGTGACACCTACTCATTTGGCTATTGTTCTTGAGTATGCTGCTGGTGGTGAGCTTTTTGATAGGATATATTCCGCTGGAAGATTCAGCGAAGACGAGGCAAGATATTTCTTCCAGCAACTAATATCCGGAGTTAACTATTGTCATTCTATGCAAATTTGTCACAGAGACTTGAAATTGGAAAACATTCTATTGGATGGAAATCCAGCACCTCGACTTAAGATATGCGACTTTGGTTTTTCCAAGTCTGCTTTACTCCATTCTCAACCTAAATCAATGAAAATAATGAATGTTGAATATTCTATACCTGACTATGTACATATATCTTCGGACTGTAGGCAACTTTTGTCTCGTATTTTTGTTGCCAATCCAGCTAAGAGGATTATGATGTTAGAGATAAAACAACACCCTTGGTTTCGGAAGAACTTGCCTAGAGAATTAGTTGAGGGTGATAGAAAATGGTACAAGAAAGCAGAAAATGAACAAATGCCAAGACAAAGTGTGGAAGAAATCACGAAGATTGTAAGAGAAGCAATGATTCCATGTTCATGTGCATTGGATGTTGCTTATGTTGATGAGATTCAAGAGATTGAAGAGTAA 804 0.3706 MEEERYEILKDLGSGNFGVAKLAKHINTGELVAIKYIERGYKINENVQREIINHQCLKHPNIIKFKEVFVTPTHLAIVLEYAAGGELFDRIYSAGRFSEDEARYFFQQLISGVNYCHSMQICHRDLKLENILLDGNPAPRLKICDFGFSKSALLHSQPKSMKIMNVEYSIPDYVHISSDCRQLLSRIFVANPAKRIMMLEIKQHPWFRKNLPRELVEGDRKWYKKAENEQMPRQSVEEITKIVREAMIPCSCALDVAYVDEIQEIEE* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3996 267 ProSiteProfiles Protein kinase domain profile. 6 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3996 267 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Psa2g3996 267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Psa2g3996 267 Gene3D Transferase(Phosphotransferase) domain 1 84 158 - -
Psa2g3996 267 Gene3D Transferase(Phosphotransferase) domain 1 159 260 - -
Psa2g3996 267 SMART serkin_6 6 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3996 267 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Psa2g3996 267 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 4 160 - -
Psa2g3996 267 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 161 247 - -
Psa2g3996 267 Pfam Protein kinase domain 6 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3996 267 PANTHER SERINE/THREONINE KINASE 4 160 - -
Psa2g3996 267 PANTHER SERINE/THREONINE KINASE 161 247 - -
Psa2g3996 267 SUPERFAMILY Protein kinase-like (PK-like) 4 239 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3996 Psa-Chr2 414889054 414890906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3996 5 210 CBL-interacting serine-threonine protein kinases AT2G26980 33.835 3.61e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Psa2g3996 Pkinase 6.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3996 K14498 - nnu:104609824 338.576