Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3953 ATGGAGCTTTTGAAACTGTTACTGATCCTAATTGCTGTTTTCTCCAATATTCACACTATGAAGAGTAGTGAATTTCTTGTTCACGAGTATTACAAGGAAAAATGTCCTTTAGCTGAAGAGATAGTGAGACATAACATGGAAGTAGCAATTTTCAAAGATCCACGTTTAGCAGCATCATTACTTCGATTACACTTCCATGATTGTTTTGTCATGAGAGGAGGACTAAGATGGGATGTGTGGCTTGGGAGGAAGGATTCCCTTGAGTCAAGTTTCAGTGGAGCCAACCTATTCATCCCTGCTCCAAATTCTTCTTTACATACTTTAATCAACAACTTTAAGCAACAAGGTCTTGATGTCGAAGACTTGGTGGTTCTATCAGGTAGCCATACTATAGGAAGGGCAAGATGTGTTAGTTTCAGGCAAAGGATCTACGAAACAAAACAAGAATATCACTACGGCTACGATCACTACAAAAGATACACAACCTTCAGAAGAATCCTAGGGTCAATTTGTCCTGTTAAAGGAAGGGACAACAAATTCGCACCCCTTGATTTTCAAACACCGAAAAGGTTTGATAACCACTACTTCATAAACATTCTTGAAGGAAAGGGATTGTTAGGTTCTGATAATGTTTTGATCAGCCAAGACATGGATGGAAAGATCAGGGAGCAGGTGTGGGGCTATGCCTCCAATGAAAAACTTTTCTTTACTTCATTTGCTAAGTCTATGATTAAGATGGGAAACATCAATGTTCTTACAGGAGATGCAGGAGAAATAAGAAGGAATTGTAGGTTTGTGAACACTTAG 807 0.3891 MELLKLLLILIAVFSNIHTMKSSEFLVHEYYKEKCPLAEEIVRHNMEVAIFKDPRLAASLLRLHFHDCFVMRGGLRWDVWLGRKDSLESSFSGANLFIPAPNSSLHTLINNFKQQGLDVEDLVVLSGSHTIGRARCVSFRQRIYETKQEYHYGYDHYKRYTTFRRILGSICPVKGRDNKFAPLDFQTPKRFDNHYFINILEGKGLLGSDNVLISQDMDGKIREQVWGYASNEKLFFTSFAKSMIKMGNINVLTGDAGEIRRNCRFVNT* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3953 268 ProSitePatterns Peroxidases proximal heme-ligand signature. 121 131 IPR019793 -
Psa2g3953 268 Gene3D Peroxidase, domain 2 99 247 - -
Psa2g3953 268 PANTHER PEROXIDASE 72-RELATED 5 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g3953 268 PANTHER PEROXIDASE 72-RELATED 71 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g3953 268 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g3953 268 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g3953 268 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Psa2g3953 268 ProSiteProfiles Plant heme peroxidase family profile. 58 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3953 268 Gene3D - 72 267 - -
Psa2g3953 268 SUPERFAMILY Heme-dependent peroxidases 27 267 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa2g3953 268 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3953 268 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3953 268 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3953 268 Pfam Peroxidase 73 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3953 268 Gene3D - 26 71 - -
Psa2g3953 268 PANTHER PEROXIDASE 20 5 70 - -
Psa2g3953 268 PANTHER PEROXIDASE 20 71 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3953 Psa-Chr2 412802777 412804181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3953 16 267 Peroxidase AT2G35380 53.150 2.11e-95 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3953 K00430 - fve:101313615 367.081