Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3931 ATGCGTTTCTTTCTTCTCTTTTTCTCTCTCTTCCATTTCCGTTTTCAGAATGTTCTTCCATCTCCAATCTCAGAATACCGCGCACTTCTTTCCCTCCGTGAAACAATTACCGATTCTACCCCTCCCGTTCTCTCTTCATGGAACATCTCAACCACACACTGTATCTGGTTAGGTGTCACGTGCGACGCACGCCGCCACGTTACCGCTCTTAACCTCACCGGACTTAACCTCTCCGGCACACTCTCCGATAATCTCGCTCATCTTCCGTTTCTCTCTAACCTTTCCTTAGCTGATAACAAATTCTCCGGTCCCATCCCTCCGTCGCTCTCCGCCGTATCTGGTCTCCGGCTACTTAACCTCTCCAACAATGTCTTCAACGGAACTTTTCCGACCGAGCTTTCTCAGCTCAAGAGCCTCGAGATTCTTGACCTGTACAACAACAACATGACAGGAACACTTCCTCTTGCTGTTACCGAGTTGCCGAATCTCCGTCATTTGCATCTCGGTGGTAACTACTTTACCGGTCAGATCCCGCCGGAGTTTGGACTATGGCAACACTTGGAGTATTTAGCTGTTTCCGGTAACGAACTTGCCGGAACTATCCCGCCGGAGATCGGAAACTTAACCAGTCTCCGTGAGCTTTACATCGGATATTTCAACACGTACACCGGTGGCATTCCTCCGGAGATTGGAAACTTGACTGAGCTTATCCGTCTTGACGCAGCTTACTGCGGTTTATCCGGCGAGTTACCGCCGGAGATGGGGAAACTTCAAAACCTAGACACACTGTTTCTTCAAGTAAATGGACTTTCAGGTTCTCTTACATGGGAGCTTGGAAATTTGAAAAGCTTGAAATCCATGGATTTGTCTAACAACATGTTAACCGGTGAGATTCCCACGAGTTTCGGTGAACTGAAGAATCTCACGCTTCTTAACCTTTTTAGAAACAAACTTCACGGAGCTATTCCGGAGTTTGTGGGAGATATGCCGGCGTTGGAGGTTGTTCAGTTGTGGGAGAATAACTTCACCGGTAACATTCCGATGAGTTTGGGAAGAAATGGAAGATTAACTCTTCTGGATCTTTCTTCAAACAAGTTAACTGGTACACTTCCACCTTATTTGTGTTCTGGGAATCATCTTCAAACACTGATAACTCTTGGGAATTTTCTGTTTGGTCCAATTCCTGAATCTCTTGGAAGTTGTGAATCTTTGAATAGGATTCGAATGGGTGATAATTTTCTGAATGGTTCAATTCCTAAAGGTCTTTTTGGACTTCCGAAACTAACTCAGGTTGAGCTTCAAGATAATTATCTATCTGGAAATTTTCCTGAGACTCATTCTGTATCTGTTAACCTTGGTCAGATTACTCTCTCAAACAATCAACTTTCGGGACCATTGCCGCCTTCTATTGGTGATTTTTCTAGCATGCAGAAGCTTCTTCTTGATGGCAACATGTTTTCTGGTAAGATTCCATCACAGATTGGAAGGTTGCAACAGCTTTCAAAGATTGATTTTAGTCATAACAAGTTTTCTGGTCCAATTGCCCCTGAGATTAGTCAATGCAAGCTTTTAACCTTCGTTGATCTTAGTCATAACGAGTTAGCGGGGGTTATTCCAAATGAGATTACTGGTATGAGGATATTGAATTACTTGAATATTTCGAGAAATCATTTAGTTGGTAGCATTCCTGGTTCTATAGCTTCGATGCAAAGCTTAACTTCTGTTGATTTTTCGTATAACAATCTATCTGGTTTGGTTCCTGGTACCGGTCAATTCAGTTACTTTAACTACACGTCTTTCTTGGGAAACCCTGATCTTTGTGGACCTTATTTGGGTGCTTGTAAAGATGGTGTTGTAAATGATGCTAATCAGACTCATCATGATAAGGGTCATATTTCTTCTACTGTGAAGCTGCTACTTGTTATTGGGTTGCTTGCATGCTCCATTGTATTTGCTATTGCAGCGATATTCAAGGCCCGGTCTTTGAAGAAGGCTAGCGAGGCCCGTGCGTGGAAATTGACCTCATTTCAACGGTTGGAGTTCACTGCTGATGATATTTTGGTTTCCTTGAAGGAGGATAATATCATAGGAAAAGGAGGTGCTGGCATTGTTTACAAAGGGACGATGCCGAATGGGGAACTTGTTGCTGTTAAAAGGCTTCCGGTTATGAGCAGAGGTTCGTCTCATGATCATGGATTCAATGCTGAGATTCAGACATTGGGGAGAATCCGACATAGGCACATTGTTAGGCTATTGGGTTTCTGTTCAAGCCATGAGACAAATCTTTTGGTTTATGAGTACATGCCTAATGGAAGTTTAGGTGAAGTTCTTCATGGAAAGAAAGGGGGTCATTTGTATTGGGATACCAGGTATAAAATTGCTGTCGAGGCTGCAAAGGGACTTTGCTATTTACACCATGATTGTTCTCCACTTATTGTTCATCGAGATGTAAAATCAAACAACATACTTCTTGATTCTAATTATGAAGCCCATGTTGCTGATTTTGGGCTGGCCAAGTTCCTGCAAGATTCTGGAACATCCGAATGCATGTCGGCTATTGCTGGTTCATATGGATACATAGCTCCAGAGTACGCATATACATTGAAAGTTGATGAGAAAAGCGATGTATACAGCTTTGGTGTTGTTCTTTTAGAGCTTGTAACTGGAAGGAAACCAGTAGGAGAATTCGGCGACGGTGTGGACATTGTGCAATGGGTGAGAAAAATGACAGACTCCAACAAAGAAGGAGTTCTAAAAGTCCTAGATCCTAGACTTTCATCAGTTCCACTTCATGAGGTCATGCATGTTTTCTATGTAGCCATTCTGTGTGTCGAAGAACAAGCAGTAGAAAGACCAACCATGCGCGAAGTTGTTCAAATTCTGACAGAGCTTCCAAAGTCACCGGAGTCTAAACTAGGAGACTCAACAATTACAGAATCCTCTTTGTCACCATCAAATGCTTTAGAATCTCCAACTTCAGCCTCGAAAGATGATCAACATCCTCCGCAATCTCCACCGCCCGATCTCTTAAGCATTTAA 3039 0.4301 MRFFLLFFSLFHFRFQNVLPSPISEYRALLSLRETITDSTPPVLSSWNISTTHCIWLGVTCDARRHVTALNLTGLNLSGTLSDNLAHLPFLSNLSLADNKFSGPIPPSLSAVSGLRLLNLSNNVFNGTFPTELSQLKSLEILDLYNNNMTGTLPLAVTELPNLRHLHLGGNYFTGQIPPEFGLWQHLEYLAVSGNELAGTIPPEIGNLTSLRELYIGYFNTYTGGIPPEIGNLTELIRLDAAYCGLSGELPPEMGKLQNLDTLFLQVNGLSGSLTWELGNLKSLKSMDLSNNMLTGEIPTSFGELKNLTLLNLFRNKLHGAIPEFVGDMPALEVVQLWENNFTGNIPMSLGRNGRLTLLDLSSNKLTGTLPPYLCSGNHLQTLITLGNFLFGPIPESLGSCESLNRIRMGDNFLNGSIPKGLFGLPKLTQVELQDNYLSGNFPETHSVSVNLGQITLSNNQLSGPLPPSIGDFSSMQKLLLDGNMFSGKIPSQIGRLQQLSKIDFSHNKFSGPIAPEISQCKLLTFVDLSHNELAGVIPNEITGMRILNYLNISRNHLVGSIPGSIASMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGACKDGVVNDANQTHHDKGHISSTVKLLLVIGLLACSIVFAIAAIFKARSLKKASEARAWKLTSFQRLEFTADDILVSLKEDNIIGKGGAGIVYKGTMPNGELVAVKRLPVMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSSHETNLLVYEYMPNGSLGEVLHGKKGGHLYWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLSSVPLHEVMHVFYVAILCVEEQAVERPTMREVVQILTELPKSPESKLGDSTITESSLSPSNALESPTSASKDDQHPPQSPPPDLLSI* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3931 1012 Pfam Protein kinase domain 692 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3931 1012 Pfam Leucine rich repeat 114 172 IPR001611 GO:0005515
Psa2g3931 1012 MobiDBLite consensus disorder prediction 968 1012 - -
Psa2g3931 1012 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Psa2g3931 1012 Pfam Leucine Rich Repeat 283 305 IPR001611 GO:0005515
Psa2g3931 1012 Gene3D Transferase(Phosphotransferase) domain 1 768 981 - -
Psa2g3931 1012 MobiDBLite consensus disorder prediction 969 999 - -
Psa2g3931 1012 Gene3D Ribonuclease Inhibitor 23 177 IPR032675 -
Psa2g3931 1012 Gene3D Ribonuclease Inhibitor 276 354 IPR032675 -
Psa2g3931 1012 SMART LRR_typ_2 354 377 IPR003591 -
Psa2g3931 1012 SMART LRR_typ_2 281 304 IPR003591 -
Psa2g3931 1012 SMART LRR_typ_2 160 183 IPR003591 -
Psa2g3931 1012 SMART LRR_typ_2 497 521 IPR003591 -
Psa2g3931 1012 SMART LRR_typ_2 305 329 IPR003591 -
Psa2g3931 1012 SMART LRR_typ_2 136 159 IPR003591 -
Psa2g3931 1012 SMART LRR_typ_2 569 592 IPR003591 -
Psa2g3931 1012 Gene3D Ribonuclease Inhibitor 178 275 IPR032675 -
Psa2g3931 1012 SMART serkin_6 690 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3931 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Psa2g3931 1012 Gene3D Phosphorylase Kinase; domain 1 655 767 - -
Psa2g3931 1012 Gene3D Ribonuclease Inhibitor 355 618 IPR032675 -
Psa2g3931 1012 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 1002 - -
Psa2g3931 1012 SUPERFAMILY Protein kinase-like (PK-like) 690 961 IPR011009 -
Psa2g3931 1012 ProSiteProfiles Protein kinase domain profile. 690 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3931 1012 SUPERFAMILY RNI-like 70 391 - -
Psa2g3931 1012 SUPERFAMILY L domain-like 352 611 - -
Psa2g3931 1012 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 1002 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3931 Psa-Chr2 411918337 411923134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3931 22 991 Receptor kinase-like Gene Family AT5G65700 79.673 0.0 1582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa2g3931 Pkinase 8.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3931 - - ccaj:109800149 1729.53