Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3923 ATGCTCTCTTCCCTTTCTGTTTCCGATTTCACGGCGTTAGACGGAGTTTTAACGCCATGGGATTATGATTACCCTACCGTATTCTCACCCTTCATTCCCACTAGCCCTAAGCTCGCTTCAAGCTCCGGTTCAGGTGAACCAAACCAAAAACCGGCCTCGGACAACTCGAACCGGAACATCGAGGACAGAAAGAAGAGAAGAATGATATCGAACCGGGAATCAGCACGGCGGTCACGTATGCGTAAACAGAGACATTTAGAGAATCTCCGGAACCAGTTGAACTTGTTTCGGGTTGAAAACCGGGAATTGAAGAATGCTTTGCAGTTCCTAATGCTCCACTGTAATCGTCTACGAACAGAAAACGAGTGGCTCCGGTTAGAACGAACCATGTTGGGTCAAAAACTGTCAAACATAAGTCAAAGTTTGGTTTTTCAACCATTCTCCTCTGCATGGCCATGCAATATTGTCACGGCGGAATGA 480 0.4667 MLSSLSVSDFTALDGVLTPWDYDYPTVFSPFIPTSPKLASSSGSGEPNQKPASDNSNRNIEDRKKRRMISNRESARRSRMRKQRHLENLRNQLNLFRVENRELKNALQFLMLHCNRLRTENEWLRLERTMLGQKLSNISQSLVFQPFSSAWPCNIVTAE* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3923 159 Pfam bZIP transcription factor 61 122 IPR004827 GO:0003700|GO:0006355
Psa2g3923 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 66 81 IPR004827 GO:0003700|GO:0006355
Psa2g3923 159 MobiDBLite consensus disorder prediction 38 55 - -
Psa2g3923 159 Gene3D - 62 138 - -
Psa2g3923 159 SMART brlzneu 59 123 IPR004827 GO:0003700|GO:0006355
Psa2g3923 159 PANTHER BZIP TRANSCRIPTION FACTOR 23 159 - -
Psa2g3923 159 Coils Coil 72 120 - -
Psa2g3923 159 MobiDBLite consensus disorder prediction 38 84 - -
Psa2g3923 159 PANTHER BZIP TRANSCRIPTION FACTOR 44 23 159 - -
Psa2g3923 159 MobiDBLite consensus disorder prediction 56 76 - -
Psa2g3923 159 CDD bZIP_plant_GBF1 64 115 IPR045314 GO:0003700|GO:0006355
Psa2g3923 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 61 124 IPR004827 GO:0003700|GO:0006355
Psa2g3923 159 SUPERFAMILY Leucine zipper domain 63 112 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3923 4 144 bZIP Transcription Factor Family AT3G49760 41.549 7.58e-31 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa2g3923 bZIP_1 1.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3923 - - gmx:102661188 192.2