Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3910 ATGGGCATTCTTCCAACCACTAGAGAAACAACTATCACTTTTGAAAATCCTGGGCTAAATGAAACAGAAGATGTGGAAAGTAAAGATGAATTAATTTTTAATCATACTGCTAGTGTTGGCGACCTTGAAGGATTGAAACTTGTGTTAGCCTTTGGTGCTGATAAACACGAAGAAGATTTAGAGGGAAGGAATGCTTTGCATTTTGCTTGTGGTTACAATGAGGTGAAGTGTGTGCAAGTTCTCCTAGAGGCTGAAGCTAAAGTATATGCTTTAGATAAAAACAAGAACTCAACTCTTCATTATGCAACATGTTATGGCATGAAGGAATGTGTGGAGTTGCTCGTTGAAAACGGTGATGTAGTTACTCTATAG 372 0.379 MGILPTTRETTITFENPGLNETEDVESKDELIFNHTASVGDLEGLKLVLAFGADKHEEDLEGRNALHFACGYNEVKCVQVLLEAEAKVYALDKNKNSTLHYATCYGMKECVELLVENGDVVTL* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3910 123 SUPERFAMILY Ankyrin repeat 29 118 IPR036770 -
Psa2g3910 123 Gene3D - 7 123 IPR036770 -
Psa2g3910 123 ProSiteProfiles Ankyrin repeat profile. 61 93 IPR002110 GO:0005515
Psa2g3910 123 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 6 123 - -
Psa2g3910 123 SMART ANK_2a 94 123 IPR002110 GO:0005515
Psa2g3910 123 SMART ANK_2a 28 57 IPR002110 GO:0005515
Psa2g3910 123 SMART ANK_2a 61 90 IPR002110 GO:0005515
Psa2g3910 123 ProSiteProfiles Ankyrin repeat region circular profile. 61 93 - -
Psa2g3910 123 PANTHER - 6 123 - -
Psa2g3910 123 Pfam Ankyrin repeats (3 copies) 38 119 IPR002110 GO:0005515
Psa2g3910 123 ProSiteProfiles Ankyrin repeat region circular profile. 94 123 - -
Psa2g3910 123 ProSiteProfiles Ankyrin repeat profile. 94 123 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3910 Psa-Chr2 410088753 410089124 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3910 17 118 MAP Kinase Kinase Kinase AT3G59830 34.314 4.60e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3910 - - cam:101510709 161.384