Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3890 ATGGGAAGTTATGTTGCCACCCCATTTTCTTTCTCTAGTCTTCTCTGTCATGAACAAACCGATTCCACATTCTTCTTCCAACAAGATGAAGATGAAAACACCATCTTTGTTAATAACAACAACCTTTCTTTCCTTTTGGAAGATGATGAAGACGAATACATTGATTATCTATTCAAACAAGAATCAGGATTTGGATCCTCCACCACTCATTTCTTATCCTACCACAATGATGTTGATGATGATATATTCTGGTTGAGAAATGCTCGTTTGCATGCCATTGATTGGATTTTCAATACACAAGCAAAATTTGGATTCACACTTCAAACAGCTTATTTATCAATCACTTATTTTGACCGCTTTCTCTCCAAGCGATCCATTGATGAATCAAAACCGTGGGCTATTCAATTATTATCAGTGGCATGTTTATCAATAGCAGCAAAAATGGAAGAACAAAGAGTTCCTCTATTATCAGAATATCCAATAGAGTTTCGATTTGAGAATAAAGTTATTAAGAACATGGAGATTTTAATTTTGGCTACTTTAGAATGGAAAATGGGATTGCCAACACCTTTTGCTTATTTACATTATTTCTTCACCAAGTTCTGCAATGGATCAAGACCAGAAACAATAATCACAAAAGCCACAAAACACATTATAACATTGGTCAAAGATTTTAATTTGATGAATCAACGACCATCTATAATCGCTTCTGGTTCTATATTAGCAGCTTTTGATTCTACATTAACTCAGAAGGAAATTGATATTCAGATAAAGCTAATCTCATCATGGGGAAATATAGAAAGTGAACAAGTGTTTTCATGTTACAATGTTATACAAGAAAAGAAGAGAGACAAAGTTAAGAAGACACCTTCCTCGGATTTATTATCAAAAGAGTCGAATTTGACTTATGTTGTTGAGACCAAATCTAGTGGTTTTTCAGGAGTTAAGAGAAAGCTTGGTTATGAGAATATTGAAGATTTTCAAGAACAAAAGCTACAACCACCTTAG 1008 0.3373 MGSYVATPFSFSSLLCHEQTDSTFFFQQDEDENTIFVNNNNLSFLLEDDEDEYIDYLFKQESGFGSSTTHFLSYHNDVDDDIFWLRNARLHAIDWIFNTQAKFGFTLQTAYLSITYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQRVPLLSEYPIEFRFENKVIKNMEILILATLEWKMGLPTPFAYLHYFFTKFCNGSRPETIITKATKHIITLVKDFNLMNQRPSIIASGSILAAFDSTLTQKEIDIQIKLISSWGNIESEQVFSCYNVIQEKKRDKVKKTPSSDLLSKESNLTYVVETKSSGFSGVKRKLGYENIEDFQEQKLQPP* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3890 335 Pfam Cyclin, C-terminal domain 188 282 IPR004367 -
Psa2g3890 335 CDD CYCLIN 89 178 IPR013763 -
Psa2g3890 335 Pfam Cyclin, N-terminal domain 77 185 IPR006671 -
Psa2g3890 335 SMART cyclin_7 94 179 IPR013763 -
Psa2g3890 335 Gene3D - 86 186 - -
Psa2g3890 335 PANTHER CYCLIN-D5-1 45 318 - -
Psa2g3890 335 PANTHER CYCLINS 45 318 IPR039361 -
Psa2g3890 335 ProSitePatterns Cyclins signature. 89 120 IPR006671 -
Psa2g3890 335 SUPERFAMILY Cyclin-like 46 185 IPR036915 -
Psa2g3890 335 Gene3D - 187 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3890 Psa-Chr2 409287146 409289553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3890 10 268 Core Cell Cycle Gene Families AT4G37630 36.029 1.03e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3890 K18811 - gmx:100798140 400.979