Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g3885 | ATGGCTAACATGGATGGCAAATCACTCCTGAGTCCTAAGAATTCCATTCCCATACCCCCTCCTTCGCCTCAATCAGCAGCAACAGGTTATCCTTGCGAGTATGTGGTGATGAATAATTTAGCACCCAGACGGCGAAGCAGTTGTGTCCCTACTGCAACAAGAGATTTGTGGGAGCGTCTTTTCAATGAAGGTTATAAAGCCGATGTTCGCATTAATACTGATAACAGTGGCATTGTTTATGCTCATTCTAACATTATTGCGGTGGCTTCTCCTGTATTGGGAGGTATGCTGAAGCAAGCAAATCGTTCCAATCGATGGCGATCAATCTCAATTTTTGGGGTTCCACATGATGCAGTACGAGTTTTTATTCGATTCTTGTACTCTTCCTGTTACGAGAACGAAGAAATGAAGGAATTTGTCCTACATCTGTTGGTGCTGTCACATGTATATGCGGTCCCTCACTTGAAGCATGAATGTGAACAGAAGCTAGAATTGGGTTTACTCACCATAGATAATGTAGTGGATGTATTTCAACTTGCATTACTGTGTGATGCACCGCGACTCAGTCTCATTTGTCATCGTAAAATACTAAAAAACTTCAAAACTGTTTCGGAGTCAGAAGGATGGAAAGCAATGAAGCAGAGCCACCCGATTCTAGAAAAGGAACTTCTGGAATCAATGATCGAAGAAGAAAATAGTAAGAAGGAGAGGATCAGAAAAATGAACGAAAAAGAGGTCTATCTGCAATTATACGATGCAATGGAAGCTCTTGTTCACATATGTAGAGATGGTTGTCGAACTATTGGCCCTCATGATAAAGACTTCAAAGCAAACCAACAACCCTGTAGGTATACATCTTGCAAAGGGCTAGAACTGCTTGTTCGCCATTTTGCTGGTTGCAAGTTGAGAGCCCCAGGAGGTTGTGCCCATTGCAAAAGGATGTGGCAACTGTTGGAGCTGCATTCTCGACTCTGTGCTGATCCAAGTTCATGTAGAGTGCCTCTCTGCAGGAACTTTAGACAGAGACTAGCAAAACAAAGCAAGAAAGATGAAATTAGATGGACAATATTGGTTGAAAAGATCTTGAAAACAAGAGGAATTGGGATTGCACCATGCTTTCGGCCACTATGA | 1131 | 0.4235 | MANMDGKSLLSPKNSIPIPPPSPQSAATGYPCEYVVMNNLAPRRRSSCVPTATRDLWERLFNEGYKADVRINTDNSGIVYAHSNIIAVASPVLGGMLKQANRSNRWRSISIFGVPHDAVRVFIRFLYSSCYENEEMKEFVLHLLVLSHVYAVPHLKHECEQKLELGLLTIDNVVDVFQLALLCDAPRLSLICHRKILKNFKTVSESEGWKAMKQSHPILEKELLESMIEEENSKKERIRKMNEKEVYLQLYDAMEALVHICRDGCRTIGPHDKDFKANQQPCRYTSCKGLELLVRHFAGCKLRAPGGCAHCKRMWQLLELHSRLCADPSSCRVPLCRNFRQRLAKQSKKDEIRWTILVEKILKTRGIGIAPCFRPL* | 377 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g3885 | 376 | PANTHER | BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED | 11 | 374 | IPR044513 | - | |
Psa2g3885 | 376 | ProSiteProfiles | Zinc finger TAZ-type profile. | 241 | 339 | IPR000197 | - | |
Psa2g3885 | 376 | PANTHER | BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 | 11 | 374 | - | - | |
Psa2g3885 | 376 | Gene3D | Potassium Channel Kv1.1; Chain A | 45 | 167 | IPR011333 | - | |
Psa2g3885 | 376 | ProSiteProfiles | BTB domain profile. | 67 | 135 | IPR000210 | GO:0005515 | |
Psa2g3885 | 376 | SUPERFAMILY | TAZ domain | 244 | 344 | IPR035898 | - | |
Psa2g3885 | 376 | Pfam | TAZ zinc finger | 252 | 336 | IPR000197 | - | |
Psa2g3885 | 376 | Gene3D | TAZ domain | 242 | 364 | IPR035898 | - | |
Psa2g3885 | 376 | Pfam | BTB/POZ domain | 59 | 163 | IPR000210 | GO:0005515 | |
Psa2g3885 | 376 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Psa2g3885 | 376 | Coils | Coil | 221 | 244 | - | - | |
Psa2g3885 | 376 | CDD | BACK | 169 | 229 | - | - | |
Psa2g3885 | 376 | SUPERFAMILY | POZ domain | 46 | 163 | IPR011333 | - | |
Psa2g3885 | 376 | SMART | TAZ_2 | 244 | 337 | IPR000197 | - | |
Psa2g3885 | 376 | Gene3D | - | 168 | 241 | - | - | |
Psa2g3885 | 376 | SMART | BTB_4 | 67 | 167 | IPR000210 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g3885 | Psa-Chr2 | 408874745 | 408879673 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TAZ | Psa2g3885 | BTB | 1.6e-10 | CL0033 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g3885 | - | - | lja:Lj2g3v1968190.1 | 591.652 |