Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3884 ATGAAAGTTCATAATTCAAGCTTCAATATCATAATCTTCAGCTGCTGCTTCTTCTTCTTCACACTCTCTGTATCAATCCCAGTTACAGAAAATGAATCCGATCATCACACAAGAAGAATTCTCCATCAACCATTATTCCCGGCGACTTCAGCTCCACCACCAACCCCCACCGTCACACAACCACCACCTTCTCCCAATAATATTCCATTCTTCCATGAGTATCCAGAAGGACCACCGTCGAATCAGAATCAAGCAGCACCGGTAATATCATCACCAAACGCTTCATCGGCGAATCCAACGGCAACACAACCAGCAAAAGGAACAAAGAAAGTAGCCATTGTGATCTCCGTTGGAATTGTGACGCTTGGAATGTTGTCGGCGTTGGCTTTCTTTTTATACAAACACAGAGCAAAACACCCTGCGGATACACAGAAGCTAGTGTGTGATAACACACAGAGGAACAACGATTCAAATTCAGCTCCTCCAGTACCGTCGAGTTTTCTCTATATCGGAACAGTGGAACCTTCCAGAAGGTCAACGACGGTCAACGATCCCAGAGAAACAGAGAAGCCTAACCGTTCGCCGTATCATAAACTGAATTCCGTTAAGCGATCCGATCGGTATCGACCTAGTCCTGAGTTGCAGCCAATGCCGCCGCTGAGTAAACCTCCCGTCGACGGAAATATCCCGCCGGCGATGTCTTCGTCTTCTTCCGATGAGGAAAGTAACGAGACAGCGTTTCATTCGCCGCAAAACTCTTCGGTAAGTCAAGAAGACGGGTTTTACACGCCGGTAACACGTCTCTTTAACGGTAGCTCGGCGAAGAGAGAGAATCATTCGACGGTTACGCCTCTTCCGTTGTCAAAGAGAACTTCACCGAAATCTCGTCTTTCTGCTGCGTCACCGGATATCCGACACGTCATCATACCGTCTATCAAACAGACTCCAAATCCGCCACGATCTTCTGCATCTATAAAGAGGCTAAGTGTAGGAGATGATTCAGCTTTTAGTGTAACAAAAGGTTCAGACTCTGTTCCAGATCATGTTGATAATGATGAGAGTGTGAGATCTTCTTCCGAGAGGTTTGAAGACGAAACCAATGAAACGGAAAGTGGAAAACCGAAGTTGAAAGCTTTGCATTGGGATAAAGTTCGAGCTACTTCAGACCGTGCTACTGTGTGGGACCAAATTAAATCAAGTTCATTTCAATTGAATGAGGATATGATGGAGTCCTTGTTTGGCTGCAACAATGCAACGAATTCTGCTCCAAAACCGAAAGAACAAGGTGTTAGAAAGTCGGTTCTTCCCTCTGCTGATCATGAGAACAAGGTGTTAGATCCTAAGAAGTCACAGAACATAGCTATACTTCTAAGGGCACTGAATGTGACAAGAGATGAGGTTTCTGAGGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACCCTAGTAAAGATGGCTCCCACTAAAGAGGAGGAGATAAAATTGAAAAACTTCAACGGCGATCTCTCGAAACTTGGATCTGCAGAGAGATTTCTTAAAGCAGTGCTTGATATCCCTTTTGCCTTCAAAAGAGTTGAAGCTATGCTATACAGAGCCAATTTTGATTCAGAAATCAACTACCTCAAGAAGTCCTTCCAAACCCTTGAAGCAGCAAGTGAGGAATTAAGGAACAGTCGATTATTCTTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTCGGCACTAATCGAGGAGACGCTAAAGCTTTCAAACTCGACACCCTCCTAAAACTCGCAGATATAAAGGGAACAGATGGAAAAACCACGTTACTCCACTTTGTTGTCCAAGAGATCATTAGATCTGAAGGTGCAGAAACTGAACCTGCAAAAGGAAGTATTCCCGAACAAATGGAGTCTAAGTTTAACGAGGAGCAGTTTAAGAAAAATGGATTGCATGTTGTGGCCGGTCTCAGTAAAGACCTTGATAGTGTCAAAAAAGCAGCAGGAATGGACTCAGATGTCTTGAGCGGCTACGTTACAAAGCTTGAAACGGGACTTGAAAAAGTTCGGTTCGTTTTGCAATATGAAAAACCAGATATGAAAGGCAAATTCTTTAATTCCACAAAACTCTTTTTGAAATATGCAGAAGATGAAATAGTGAAAATTAAGGCTCGTGAGAAAGAGGCTTTATTCCTTGTGAAAGAAGTTACTGAATACTTTCATGGGAATGCAGCAAAGGAAGAAGCACACCCTTTAAGAATTTTCATGATTGTGAGAGATTTTTTAAACATTTTGGACTTGGTTTGCAAAGAAGTGGGAAGGATGCATGATAGAATTGTCGGCGGCGCTTCAAGATCCTTCAGAATAGCTTCAAATGCACCATTACCGGTTCTTAACAGGTACAATGGGAAACAAGATAGAAACTCGGATGAGGAAAGCTCATCATCCCCTTAG 2460 0.4325 MKVHNSSFNIIIFSCCFFFFTLSVSIPVTENESDHHTRRILHQPLFPATSAPPPTPTVTQPPPSPNNIPFFHEYPEGPPSNQNQAAPVISSPNASSANPTATQPAKGTKKVAIVISVGIVTLGMLSALAFFLYKHRAKHPADTQKLVCDNTQRNNDSNSAPPVPSSFLYIGTVEPSRRSTTVNDPRETEKPNRSPYHKLNSVKRSDRYRPSPELQPMPPLSKPPVDGNIPPAMSSSSSDEESNETAFHSPQNSSVSQEDGFYTPVTRLFNGSSAKRENHSTVTPLPLSKRTSPKSRLSAASPDIRHVIIPSIKQTPNPPRSSASIKRLSVGDDSAFSVTKGSDSVPDHVDNDESVRSSSERFEDETNETESGKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCNNATNSAPKPKEQGVRKSVLPSADHENKVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNFNGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDSEINYLKKSFQTLEAASEELRNSRLFFKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLADIKGTDGKTTLLHFVVQEIIRSEGAETEPAKGSIPEQMESKFNEEQFKKNGLHVVAGLSKDLDSVKKAAGMDSDVLSGYVTKLETGLEKVRFVLQYEKPDMKGKFFNSTKLFLKYAEDEIVKIKAREKEALFLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLNILDLVCKEVGRMHDRIVGGASRSFRIASNAPLPVLNRYNGKQDRNSDEESSSSP* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3884 819 MobiDBLite consensus disorder prediction 314 328 - -
Psa2g3884 819 PANTHER FORMIN-RELATED 3 320 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Psa2g3884 819 PANTHER FORMIN-RELATED 321 817 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Psa2g3884 819 MobiDBLite consensus disorder prediction 230 298 - -
Psa2g3884 819 MobiDBLite consensus disorder prediction 345 376 - -
Psa2g3884 819 Pfam Formin Homology 2 Domain 368 767 IPR015425 -
Psa2g3884 819 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Psa2g3884 819 PANTHER FORMIN-LIKE PROTEIN 321 817 - -
Psa2g3884 819 PANTHER FORMIN-LIKE PROTEIN 3 320 - -
Psa2g3884 819 SUPERFAMILY Formin homology 2 domain (FH2 domain) 52 777 - -
Psa2g3884 819 MobiDBLite consensus disorder prediction 212 226 - -
Psa2g3884 819 Gene3D Formin, FH2 domain 375 785 IPR042201 -
Psa2g3884 819 SMART it6_source 366 782 IPR015425 -
Psa2g3884 819 ProSiteProfiles Formin homology-2 (FH2) domain profile. 366 793 IPR015425 -
Psa2g3884 819 MobiDBLite consensus disorder prediction 180 210 - -
Psa2g3884 819 MobiDBLite consensus disorder prediction 153 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3884 Psa-Chr2 408869878 408873731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3884 367 808 FH2 protein (formin) Gene Family AT5G67470 71.011 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3884 - - mtr:MTR_5g015690 1237.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3884 2 408869878 408873731 Psa4g1922 4 139126571 139132353 PCT