Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3883 ATGAGTTGCAACGGTTGCCGTGTCCTTAGAAAGGGTTGTAGTGAGTCTTGTATCTTACGCCCTTGTATTCAATGGATCGATACCCCTGAATCACAAGGCTATGCCACTCTCTTCGTAGCCAAGTTTTTCGGTCGTGCTGACCTTATGTCTTTCATTTCTAACGTCCCTCAACCACAAAGACCCGCTTTGTTTCAATCTCTCTTGTTTGAAGCGTGTGGACGAACGGTTAATCCCGTTAACGGTGCTGTTGGCCTTTTATGGACAGGAAACTGGCACGTGTGTCAAACGGCTGTTGAAACCGTTCTCCGCGGCGGAACCCTTGGGCCTATACCGGAGCTTCTATGTTTAGATGACGCATCCGAAGGGGAAGTCACGTGTAACGACGCGCGGAGGATCCGAGATCCGAACTCGAGTTTCCGGTTCGTGAGTTCCGGTGGTAAACGCAAGCGATTGAGTGAAGCTGCGAAGATTCAGACTCAGACGACGACTGATCTTAATCTCCGGTTGACTCCATGTTTTCTCCAGAACGCGTTGACCAACAGTTACCGGAGGGACGTTTGTCGGCAGGGGACACCGTCGTTGAATTCTGAGGAATCTGTGACGACGACGACGACGTGTTTGGAGAGTGGGAACGGAGATGAGTACGTTCACGACGGAGACCGGAAAGTTCTTAACCTTTTTGTTTGA 687 0.5036 MSCNGCRVLRKGCSESCILRPCIQWIDTPESQGYATLFVAKFFGRADLMSFISNVPQPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQTAVETVLRGGTLGPIPELLCLDDASEGEVTCNDARRIRDPNSSFRFVSSGGKRKRLSEAAKIQTQTTTDLNLRLTPCFLQNALTNSYRRDVCRQGTPSLNSEESVTTTTTCLESGNGDEYVHDGDRKVLNLFV* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3883 228 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Psa2g3883 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 228 - -
Psa2g3883 228 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Psa2g3883 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3883 Psa-Chr2 408818730 408820774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3883 1 228 AS2 family AT3G49940 53.612 2.29e-78 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Psa2g3883 LOB 3.2e-25 No_clan