Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3875 ATGCCTAATCATAATGAATCCATTAGTGTGGTTGTTAGAGAGTTCCAAGTTAAGAAAGACACAGAAAGAGTAGTAACACTCGAAAACACATGTGAAGTTGGACCCACTAACAAACTTTCTCTCTATACCGACATGCTCGGTGACCCCATTTGCAGACTCCGTAACTCCCCTTCTTTCCTAATGCTGGTTGCTGAAATTGGTGAAGAGATAGTTGGAATGATAAGAGGATGCATCAAAACAGTCGCATGCGGTAAAAGCCTCTCAAGATCAAAAGCAGCTCTCACTAAACAAATCCCACTTTACACCAAACTCGCTTACATATTAGGCCTTCGAGTTTCTCCTAATCAACGGAGAATGGGAATAGGGTTGAAGCTGGTAAAGAAAATGGAAGCGTGGTTTAAAGATAACGGCGCTGAATATTCATACATGGCAACGGAAAGCGAAAATTTAGCGTCCGTTAAACTCTTCACAGAGAAATGCGGTTATTTAAAGTTCCGTACGCCGTCAATCCTCGTTAACCCCGTTTACGCTCACAGAACTAAAGTTTCACGAAACGTTACTATCATTCCGTTAACTCCTTCAGACGCCGTTATTCTCTATCGTAACCGTTTCTCCACCATCGAGTTTTTCCCTCGCGACATTGACTCAGTTCTAAATAATAAACTCAGTCTCGGTACTTTTCTCGCCGTACCTTGTGGGTCCTACAGTGTTGAAAACTGGCCGGGCCCAGTAAGGTTTCTTTTGGGCCCACCTTGTTCTTGGGCCGTTTTAAGTGTTTGGAATTCGAAGGAGGTTTTTAAGCTTGAGGTACGTGGCGCATCGCGCGTGAAGCGGGCTTTTGCTAAGACAACGCGGGTTTTGGATCGGGCTTTTCCGTGGTTGAAGATGCCGTCGGTTCCGGATTTGTTTAGGCCGTTTGGGTTTCATTTTTTGTATGGGCTTGGTGGTGAAGGCCCAAAGGTTGTTAAGATGGTTAGGGCCTTGTGTGGGTTTGCGCATAATATAGCTATGGAATATGGGTGTGGGGTTGTGGCTACTGAGGTTGCTTCTTGTGAACCGCTTAGGTTAGGAATACCGCACTGGAAAATGCTATCTTGCGCAGAGGATTTATGGTGCATTAAAAGACTTGTGGAGGATTATAGTAATGATTCTGTTGGGGATTGGACTAAATCTGTGCCCGGAATCTCCATTTTTGTGGACCCTAGAGATGTTTAA 1215 0.4453 MPNHNESISVVVREFQVKKDTERVVTLENTCEVGPTNKLSLYTDMLGDPICRLRNSPSFLMLVAEIGEEIVGMIRGCIKTVACGKSLSRSKAALTKQIPLYTKLAYILGLRVSPNQRRMGIGLKLVKKMEAWFKDNGAEYSYMATESENLASVKLFTEKCGYLKFRTPSILVNPVYAHRTKVSRNVTIIPLTPSDAVILYRNRFSTIEFFPRDIDSVLNNKLSLGTFLAVPCGSYSVENWPGPVRFLLGPPCSWAVLSVWNSKEVFKLEVRGASRVKRAFAKTTRVLDRAFPWLKMPSVPDLFRPFGFHFLYGLGGEGPKVVKMVRALCGFAHNIAMEYGCGVVATEVASCEPLRLGIPHWKMLSCAEDLWCIKRLVEDYSNDSVGDWTKSVPGISIFVDPRDV* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3875 404 Pfam Acetyltransferase (GNAT) family 53 162 IPR000182 GO:0016407
Psa2g3875 404 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 10 182 IPR000182 GO:0016407
Psa2g3875 404 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 20 165 IPR016181 -
Psa2g3875 404 CDD NAT_SF 61 140 - -
Psa2g3875 404 PANTHER N-ACETYLTRANSFERASE 4 403 - -
Psa2g3875 404 Gene3D - 7 168 - -
Psa2g3875 404 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 4 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3875 Psa-Chr2 408367323 408369147 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Psa2g3875 Acetyltransf_1 3.9e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3875 - - gmx:100800613 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3875 2 408367323 408369147 Psa4g1925 4 139754734 139757157 PCT