Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3858 ATGGCGAAATCAGAAATGCCATCCATTTTCACACACCATTCACACTGGTTTCAATCGACTCTGAGGTGGATATCTCCTTCAGCCCAAATTCTCTACACTTATGACAGAGTTGTTCATGGATTTTTCACCACTTTAACTGTCAAGAAAGTGCAACGGCTGTCAAACCAATCTGGGATTTTGAAAATTTCACCTGATAAAAAATATCAGCTTTTCATGACTAAGAGTCCACAATTTCTTGGATTAGAAAGAATTCATGCCACGCTCCCAGCATTGTCAAACAAAAGCATCGAGGACATACTTGTTCATGTTATAGAAACCAGTGTTTGGCCTGAAAGCAAGAGCTTTGATGATGTTGGGTTCTATCTGAAGGGTTTTGAGGCCGATGCTGGTCGTCCGATCAACACAACCAAGGAAACTAGGTCTCCACGAGACAATTATGGCCATGGAACCCACACAGTTAGCACGACTGTAGGGTCTCCAGTGAGAAACGCAAGTCTTTTCGCCGCAATTGATCAAGCTATTGCAGACAACGTCAATGTCCTTTCATCATTGATCGGATATCCAGCACTTGAATATTACGAGGATATCGTTGCAATAAGAGCCTTTGCAGCAATGGAGCATGGGATTATGATATCTTGTGCTGGAGGCAACTCTGTTCCCGGATCTTCTGGTATCACCAATGTAGCACCTTGGATAACCAAAGTGGGAGCTAGCACAATCGACCGAGATTTCCCTGCATATATCACTCTCGGAAACAATCAAAGTTATACAGGAGTGTCTCTTTACAATGGTAGTTCTTTACCTGATACTCCTGTGTCGTTTATATATGCAGGGAATGCAAGCATTCATGATTATGAAGAAGAAGGGATACCTAGCGAGTGTGATTCGGGTTACTTGGCCAAAGAAAAAGTAACTGGAAAGATCGTGATGTGTGAGTCTGGAATCACTTATGGTCCGGAGAAAGGAAATACAGTGAAATCACTTGGTGCTTTGGGTAGGGTGTTGGTCAACTCTGCTGTTGAGGTAGAGGAGTGGTTTGCAGATCCCCATGTTTTGCCAACAATAATTGTCAAGTTCATAGCAGCAGGAACAAAGTTTGGGGTTGAGGTGTCTCCGGTTGTTGCAAGCTTTAGCTCACGAGGCCCCAGTTCAATAACCCTTCAAATATTGAAGCCCAATTTAATTGCACCGGATGTGGGTGTTAACATCTTAGCAGCATTTACTAAGAATGATAGTCCCACGTTCCAGCAGCCCCCACGTTGGTAA 1266 0.4344 MAKSEMPSIFTHHSHWFQSTLRWISPSAQILYTYDRVVHGFFTTLTVKKVQRLSNQSGILKISPDKKYQLFMTKSPQFLGLERIHATLPALSNKSIEDILVHVIETSVWPESKSFDDVGFYLKGFEADAGRPINTTKETRSPRDNYGHGTHTVSTTVGSPVRNASLFAAIDQAIADNVNVLSSLIGYPALEYYEDIVAIRAFAAMEHGIMISCAGGNSVPGSSGITNVAPWITKVGASTIDRDFPAYITLGNNQSYTGVSLYNGSSLPDTPVSFIYAGNASIHDYEEEGIPSECDSGYLAKEKVTGKIVMCESGITYGPEKGNTVKSLGALGRVLVNSAVEVEEWFADPHVLPTIIVKFIAAGTKFGVEVSPVVASFSSRGPSSITLQILKPNLIAPDVGVNILAAFTKNDSPTFQQPPRW* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3858 421 Gene3D - 241 367 - -
Psa2g3858 421 Pfam Peptidase inhibitor I9 7 70 IPR010259 -
Psa2g3858 421 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 1 120 - -
Psa2g3858 421 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 120 168 - -
Psa2g3858 421 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 167 415 - -
Psa2g3858 421 SUPERFAMILY Subtilisin-like 71 408 IPR036852 GO:0004252|GO:0006508
Psa2g3858 421 Pfam Subtilase family 98 402 IPR000209 GO:0006508|GO:0008236
Psa2g3858 421 CDD PA_subtilisin_like 247 365 - -
Psa2g3858 421 Gene3D Peptidase S8/S53 domain 166 412 IPR036852 GO:0004252|GO:0006508
Psa2g3858 421 Gene3D Peptidase S8/S53 domain 129 165 IPR036852 GO:0004252|GO:0006508
Psa2g3858 421 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 71 IPR037045 -
Psa2g3858 421 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 120 IPR045051 -
Psa2g3858 421 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 120 168 IPR045051 -
Psa2g3858 421 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 167 415 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3858 Psa-Chr2 406816506 406818047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3858 1 414 Subtilisin-like Serine Gene Family AT5G67360 44.980 1.10e-125 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3858 - - gmx:100815413 385.956