Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3851 ATGTCTCAAAACCAACAGCCTCTGTTACAAGACCAACAAGACGAAACGGCATACGATTCCTCCGACAAAATCGTCATTGTCGGAGAAGACGAATACGAAACCGACATCGACAACGGAGTTCGAATTCCGCCTTTTTCATGGAAGAAGCTCTGGTTATTCAGCGGTCCTGGTTTTCTAATGAGTATAGCTTTTCTGGATCCTGGAAACTTGGAGGGAGATCTTCAATCTGGTGCGATTGCTGGTTACTCTTTGTTGTGGTTGCTTATGTGGGCTACGGGTATGGGGCTTCTTATTCAGCTTTTGTCGGCGAGATTGGGTGTTGCTACGGGGAGACATTTGGCTGAGCTTTGTAGAGAGGAGTATCCTACTTGGGCTAGGATTGTTCTTTGGTTGATGACTGAAGTTGCGCTTATTGGTTCTGATATTCAAGAGGTTATTGGAAGTGCTATTGCTATTAGGATTTTGAGTAATGCCACTGTTCCTCTTTGGGCTGGTGTTGTTATTACTGCTTTAGATTGTTTTATTTTCCTCTTTCTCGAGAACTATGGTGTGAGGAAATTGGAGGCATTTTTTGCTGTTCTGATTGCTGTAATGGCTCTTTCATTTGCATGGATGTTTGGTAAAGCAAAGCCAGATGGTCTCGAAGTTCTTGTGGGTATTTTGGTTCCTAAACTTAGCTCCAGAACTATTCAACAAGCTGTCGGAGTTGTTGGTTGCATTATCATGCCCCACAACGTGTTCTTGCATTCTGCACTTGTTCAATCAAGACAGGTTGACCCGAAAAAGAAAGGCCGTGTTCAAGAAGCTCTTAAATACTACTCGATAGAGTCCACCATTGCGCTTGTTGTCTCCTTTGTCATTAATATCTTTGTCACAACTGTGTTTGCTAAGGGCTTTTATGGTACCGAAATAGCCAATAGGATCGGTCTCGTAAACGCAGGGCAGCATCTTCAGGAGAAGTATGGAGGTGGAGTATTCCCAATCCTTTATATATGGGCTATCGGGTTATTAGCAGCCGGTCAAAGTAGCACTATTACTGGTACATATGCTGGACAATTCATCATGGGTGGTTTTCTGAATTTGAAGTTGAAAAAATGGATGAGGGCATTGATTACGCGGAGTTTCGCAATCGTTCCAACCATGATAGTTGCGCTTATATTTGACACCTCAGAGGAATCATTAGATGTTCTAAATGAATGGCTTAATGTTCTTCAGTCAGTGCAAATCCCCTTCGCATTGATTCCGTTGCTTTGTTTGGTATCGAAGGAACAGATAATGGGCACTTTCAAGATCGGGTCTGTCCTCAAGACTATTTCCTGGCTTGTGGCTGCTCTGGTGATAGTGATAAACGGCTATCTTTTGCTGGAATTCTTTTCATCTGAAGTGAATGGAGCAGTGATCACCGCTGTTGTGAGCGTAATAACAGCTGCGTATGTTGCATTCATAATTTACCTTATTTCAAGCGCCGCTACTTTTCCGTCATGGCAAAGTTTAACTCAATCGAAGACCACCACGGAGAGTTGA 1524 0.4311 MSQNQQPLLQDQQDETAYDSSDKIVIVGEDEYETDIDNGVRIPPFSWKKLWLFSGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATGMGLLIQLLSARLGVATGRHLAELCREEYPTWARIVLWLMTEVALIGSDIQEVIGSAIAIRILSNATVPLWAGVVITALDCFIFLFLENYGVRKLEAFFAVLIAVMALSFAWMFGKAKPDGLEVLVGILVPKLSSRTIQQAVGVVGCIIMPHNVFLHSALVQSRQVDPKKKGRVQEALKYYSIESTIALVVSFVINIFVTTVFAKGFYGTEIANRIGLVNAGQHLQEKYGGGVFPILYIWAIGLLAAGQSSTITGTYAGQFIMGGFLNLKLKKWMRALITRSFAIVPTMIVALIFDTSEESLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGTFKIGSVLKTISWLVAALVIVINGYLLLEFFSSEVNGAVITAVVSVITAAYVAFIIYLISSAATFPSWQSLTQSKTTTES* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3851 507 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 5 505 - -
Psa2g3851 507 Pfam Natural resistance-associated macrophage protein 71 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa2g3851 507 PRINTS Natural resistance-associated macrophage protein signature 129 155 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa2g3851 507 PRINTS Natural resistance-associated macrophage protein signature 159 178 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa2g3851 507 PRINTS Natural resistance-associated macrophage protein signature 184 205 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa2g3851 507 PRINTS Natural resistance-associated macrophage protein signature 233 256 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa2g3851 507 PRINTS Natural resistance-associated macrophage protein signature 340 359 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa2g3851 507 PRINTS Natural resistance-associated macrophage protein signature 368 385 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa2g3851 507 PRINTS Natural resistance-associated macrophage protein signature 402 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa2g3851 507 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 5 505 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa2g3851 507 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 48 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa2g3851 507 Hamap Divalent metal cation transporter MntH [mntH]. 36 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3851 Psa-Chr2 406530818 406534026 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3851 3 502 Inorganic Solute Cotransporters AT2G23150 77.228 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3851 K21398 - gmx:100789871 870.537