Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3844 ATGACCCCTTTCTTTCTCACACTCATCTCTCTCTTTTCCCTTATCATCTTCACATTGAAGCTCTTCTTCCGCACAACAGCAACAAAGTTCAAGAATCTTCCTCCAGGCCCCCCATTTCTTCCCATAATTGGAAACCTTCATCAACTCAAACAACCACTCCACCTCACTCTCCAAACCTTATCACAAAAACACGGCCAAATCTTTTCTCTCTGGTTCGGCTCTCGTCTCGTCGTCGTTGTTTCGTCGTTAAAAACAGCGCAAGAATGTTTTACCAAACACGACATCGTTTTAGCGAACCGTCCTCATTTTTTATCCGGCAAATATATCGGCTACAACAACACCACAGTAGCACAGTCACCTTACGGTGACCACTGGCGCAATCTCCGTCGCATAATAACAACCGAGGTACTCTCATCTCACCGTTTGAACTCCTTCTTGGAAATACGAAGAGACGAGATCATGAGACTAATACAAAAGCTAGCACAAGTTTGTTACAGTGATTTCTCAGAAGTGGAACTTAGGCCAATGTTTTCCGAAATGACATTCAACACCATCATGAGAATGGTGTCTGGGAAAAGATACTACGGTGATGATTGCGACGTGAGCGATGTTGAGGAAGCTAGATTGTTCAGAGAGATAATCAAAGAGATTGTGAGTTTAGGAGGTGCTAACAACGTTGGTGATTTTCTAGGGTTTTTAAGGTGGTTCGATTTTGATGGTTTGGAGAAGAGGCTTAAGAGGATAAGCAAAAGAACAGATTCATTTTTACAAGGACTCATTGATGAACAAAGATTTGGTAAAAGGAACACTAATACTATGATTGATCATCTCTTGAAACAGCAACAATCACAACCTGAATACTACACAGATGAAATCATCAAAGGACTTATTGTGGTTATGCTATTGGCAGGAACGGACACATCATCTTTAACCTTAGAATGGGCTATGTCTAATTTATTAAATAATCCAAAGATATTGAAGAAGGCAAAAGATGAATTGGACAATCACATGGGACAAGATCACTTGGTAGATGAACATGATATTTCAAAACTTCCTTATCTTCAAAGCATTATTCATGAGACTTTTCGATTACATCCGGCTGCTCCATTATTAGTGCCTCATTTGTCTTCCGAAGATTTTACAATTGAAGAATATAATATCCCACAAAACACAATTTTATTGGTCAATGCTTGGGTCATTCACAGAGATCCAAATTTGTGGACAAATCCTACATGTTTTAACCCCGAAAGATTTGAGAAAGAAGGTGAGACAAATAAACTACTTTCATTTGGAATGGGAAGAAGGGTTTGTCCAGGAACAAATTTGGCACAACGCACAGTAAGTTTGACTTTAGGCTTTTTGATTCAGTGTTTTGAATGGACACGTATAGGTAAAGAAAAAATTGACATGACCGAAGGAAAAGGAATCACTGTGGGAAAGAAGATTTCCTTAAAAGTTAAGTGCAAATTACGTCATCCAGTGAAGATTAAATTTGCTTTCTAA 1503 0.3886 MTPFFLTLISLFSLIIFTLKLFFRTTATKFKNLPPGPPFLPIIGNLHQLKQPLHLTLQTLSQKHGQIFSLWFGSRLVVVVSSLKTAQECFTKHDIVLANRPHFLSGKYIGYNNTTVAQSPYGDHWRNLRRIITTEVLSSHRLNSFLEIRRDEIMRLIQKLAQVCYSDFSEVELRPMFSEMTFNTIMRMVSGKRYYGDDCDVSDVEEARLFREIIKEIVSLGGANNVGDFLGFLRWFDFDGLEKRLKRISKRTDSFLQGLIDEQRFGKRNTNTMIDHLLKQQQSQPEYYTDEIIKGLIVVMLLAGTDTSSLTLEWAMSNLLNNPKILKKAKDELDNHMGQDHLVDEHDISKLPYLQSIIHETFRLHPAAPLLVPHLSSEDFTIEEYNIPQNTILLVNAWVIHRDPNLWTNPTCFNPERFEKEGETNKLLSFGMGRRVCPGTNLAQRTVSLTLGFLIQCFEWTRIGKEKIDMTEGKGITVGKKISLKVKCKLRHPVKIKFAF* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3844 500 Gene3D Cytochrome P450 20 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 495 - -
Psa2g3844 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Psa2g3844 500 SUPERFAMILY Cytochrome P450 34 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 Pfam Cytochrome P450 34 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3844 500 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 8 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3844 Psa-Chr2 406084556 406088018 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3844 11 494 Cytochrome P450 AT4G37370 53.484 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3844 K13260 - gmx:100811727 727.243