Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3819 ATGGAACCGACATCTGTTGCAACTCCTCCAGCTTCTAGCACCGAGAATTACTCGACCAAAGTAACAGCTGAAAATGGCAATGCACATGATTCACCATCCTTGTCACCAGCTTCTGGTATGTCTTCCTGGGCAAGAAATCTGAGGCTTGGGGCAGCAGATCAGAACTCACAGACTGAGAACAATGGCATGTCGGTATTTGCTCGCTTGACTAGTGGGATTGGACTACGAGGTCCTTCAAATGAGACTGCTACGGCCAATTCAGGACCCGATCAAAGTAATTTAATTGAATCACTCACCAAAGGGTTGATGGACTCTTCGAAGAATGCAGTAAAAGCGGTGCAGACCAAAGCACGCCATATTGTCTCTCAAAATAAACGCAGATACCAGGAAGGTGGGTTTGATTTGGATATGACATACATCACTGACAATATAATAGCTATGGGATTTCCTGGTGGTGATTTTAGCTCTGGAATTTTCGGGTACATTGAGGGGTTCTATCGAAATCACATGGAAGAAGTAATCAAGTTTTTTGAAACTCATCATAAGGGAAAATACAAAGTATACAATCTTTGTTCAGAGAGGTTGTACGATGGATCGCTTTTCCAAGGGAAGGTTGCAAGCTTCCCTTTTAGTGATCATAATTGCCCTCCTATTCAACTTATAGCATCATTTTGTCAAAGTGCATATTCATGGTTGAAGGAGGATATCCAGAATGTAGTAGTTGTTCATTGTAAAGCAGGTATGGGAAGGACAGGATTGATGATTTGCAGTCTTCTTTTGTTGCTTAAGTTCTTCCCCACTGCTGAGGAAGCCATTAATTGCTTTAACCAGAAAAGATGTATAGATGGAAAGGCTCTAACTCTCCCAAGTCAGATTAGATATGTCAAATACTTTGAACGGACTTTAACACACTTCAATGGAGAAGTCCAGCCTGGACGAAGGTGTATGCTAAGAGGATTTCGGCTTCACAAATGCCCTTATTGGGTTAGACCATCCATTACAATTTCTGATCATAATGGAATTCTTTTCACAACAAAAAAGCATCCCAAGACAAAGGATCTAATGCCAGAAGATTTCTGGATCAATGCACCAAAGAAAGGAATTGTGGTCTTTGCTTTACCTGGGGAGCCTGGTGTGACAGAATTGGTTGGGGACTTCAAAATTCATTTTCATGATCGACAGGGAGATTTCTTCTGGTTTGTTCAAAACAGCTATTTCTTCTATTTTTTTCCTCTTCAAACTAGTTTTGAAAGAAACTTGAGTTTGTCAGAATCATTATGA 1281 0.4075 MEPTSVATPPASSTENYSTKVTAENGNAHDSPSLSPASGMSSWARNLRLGAADQNSQTENNGMSVFARLTSGIGLRGPSNETATANSGPDQSNLIESLTKGLMDSSKNAVKAVQTKARHIVSQNKRRYQEGGFDLDMTYITDNIIAMGFPGGDFSSGIFGYIEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDGSLFQGKVASFPFSDHNCPPIQLIASFCQSAYSWLKEDIQNVVVVHCKAGMGRTGLMICSLLLLLKFFPTAEEAINCFNQKRCIDGKALTLPSQIRYVKYFERTLTHFNGEVQPGRRCMLRGFRLHKCPYWVRPSITISDHNGILFTTKKHPKTKDLMPEDFWINAPKKGIVVFALPGEPGVTELVGDFKIHFHDRQGDFFWFVQNSYFFYFFPLQTSFERNLSLSESL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3819 426 MobiDBLite consensus disorder prediction 1 40 - -
Psa2g3819 426 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 139 305 IPR029021 -
Psa2g3819 426 ProSiteProfiles C2 tensin-type domain profile. 312 426 IPR014020 -
Psa2g3819 426 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 7 400 - -
Psa2g3819 426 CDD PTP_PTEN 136 300 IPR045101 GO:0016791
Psa2g3819 426 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 240 279 IPR000387 GO:0016311|GO:0016791
Psa2g3819 426 ProSiteProfiles Phosphatase tensin-type domain profile. 126 305 IPR029023 -
Psa2g3819 426 SMART PTEN_C2_2 310 422 IPR014020 -
Psa2g3819 426 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 7 400 - -
Psa2g3819 426 ProSitePatterns Tyrosine specific protein phosphatases active site. 242 252 IPR016130 GO:0016311|GO:0016791
Psa2g3819 426 Gene3D Protein tyrosine phosphatase superfamily 111 308 IPR029021 -
Psa2g3819 426 Pfam Protein-tyrosine phosphatase 212 266 IPR000242 GO:0004725|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3819 Psa-Chr2 403624585 403631960 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3819 3 415 Protein tyrosine phosphatase (PTP) family AT3G19420 68.150 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3819 K01110 - gmx:100801622 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3819 2 403624585 403631960 Psa2g3819 2 403624585 403631960 ECH
Psa2g3819 2 403624585 403631960 Psa6g5029 6 435577739 435585007 PCT