Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa2g3815 | ATGTCTGGTGATACTGTTCTAATTCAAGATGCCATGGGTGAGAAGGTTAAATTTTGTGTTGAGAAAACAGGTTGGGAATTTCTGCAGCTGATAGCAACACTCATTTGGTGTTTTGCAATAGCATTTACCAAAGGGTGGCTTCTTACTCTTGTTATGATGTCGACTCTTCCGCTTCTCGCTGTGTCAGGTTGCATCCTTACTGGTGAAAAGCAAGCAGTGTCTAGTTATAAAGTCTTTAGGCCAGGCATCACCAAGTCTGAGTGCTTTGCGGCGGGTCAGGCGGCGGCTTACAAAATGTTTGAGACAATTAAGAGGAAACCAGAGATAGATACTTATGATCCAAATGGAAAACATTGGAAGACATTCAAGGCAGGTGAAGTTCTTATTGATGGGATTAACTTGAAAGAGTTTCAGCTCAGATGGATCAGAGGAAAATCGGTCTTGTCAGCCAGGAGCCGCAGTGTGTTTTCTTCCAGCATCAAGGAGAACATTGCTTACGGTAAAGATGGCGCGACAATTGAGAAGATAAGATCTGCATCTGAACTTGCAAATGCTGCCAAATTCATTGATAAATTGCCACAGGGATTGGATACAATGGTTGTGACCATGGAACTCAGCTATCTGTGGGAGAAGCAGCGCATTGCCATCGCAAGGGCATCCTAA | 663 | 0.4374 | MSGDTVLIQDAMGEKVKFCVEKTGWEFLQLIATLIWCFAIAFTKGWLLTLVMMSTLPLLAVSGCILTGEKQAVSSYKVFRPGITKSECFAAGQAAAYKMFETIKRKPEIDTYDPNGKHWKTFKAGEVLIDGINLKEFQLRWIRGKSVLSARSRSVFSSSIKENIAYGKDGATIEKIRSASELANAAKFIDKLPQGLDTMVVTMELSYLWEKQRIAIARAS* | 221 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa2g3815 | 220 | PANTHER | - | 123 | 219 | - | - | |
| Psa2g3815 | 220 | PANTHER | - | 1 | 64 | - | - | |
| Psa2g3815 | 220 | PANTHER | - | 88 | 118 | - | - | |
| Psa2g3815 | 220 | Gene3D | ABC transporter type 1, transmembrane domain | 1 | 68 | IPR036640 | GO:0005524|GO:0016021 | |
| Psa2g3815 | 220 | Gene3D | - | 123 | 219 | IPR027417 | - | |
| Psa2g3815 | 220 | PANTHER | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL | 1 | 64 | - | - | |
| Psa2g3815 | 220 | PANTHER | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL | 88 | 118 | - | - | |
| Psa2g3815 | 220 | PANTHER | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL | 123 | 219 | - | - | |
| Psa2g3815 | 220 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 122 | 219 | IPR027417 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa2g3815 | Psa-Chr2 | 403561951 | 403564198 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa2g3815 | 1 | 67 | Calmodulin-binding Proteins | AT2G36910 | 35.821 | 1.22e-06 | 47.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa2g3815 | K05658 | - | jre:109000487 | 135.961 |