Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3810 ATGGCGTCCAAGTCTCCGCCTCCTCCTTCCCGGTCTTCGTCTTCTAGATCCGAGCCTCCTCTTGATCCTTCACCAACGAAAATGGAGGATACCGGTCCTGCAGTTAAAGAGGTGTTAGCGGTGATTGAATCTTTGAAGAAACAAGTTGCTGCCAAACGGATTGTTTCGGTCAAGAATAGAGTGGAGGAAAATAGACAGAAGCTGGCTGGTATCACTAACCAGCTCTGGAAATCAGCGGCGGAGAGAAAGACGTGTGACGTTGCGGATAGTGATAAAAGTCTGGATTTGTTGACTAAGAGGCAACAAGAAGCAATTGATATGCATAATGGTGTTTGTGCTGGTAATGATGATGGCGAGAGCAATGGTAATCATGGAGATGACCATGGTTCTACGGCAGTTCTTCTAGGATCTAATGTTGCTGTAAAGAATGCTGTCCGGCCTATCAAATTACCAGAAGTAAGAAGATTGCCGCCTTACACCACATGGATTTTTCTGGACAGAAATCAAAGAATGACAGAGGATCAATCGGTTTTAGGTCGGAGACGAATTTATTATGATCAAAATGGTGGTGAAGCACTTATTTGCAGTGACAGTGAGGAGGAACTAATTGATGAAGAAGAAGAAAAAAGAGAATTTGTAGAACCAGAAGATTTTATACTTCGCATGACTATCAGAGAATTTGGTTTATCTGAGGCTGTTTTGGAGTCACTGGCTCAGTGTTTTTCTAGAAAAACTAGTGACATTAAGGCCAGATATGAAACTTTTTGCAATGAAGACAATGCTGGCGGGGATTCTAAAAATGGAGATGCACAAGATACTTCTCAAAGTGACAATTCTTTTCTGGAAAAGGATCTTGAGGCGGCTCTTGACTCTTTTGACAACCTCTTTTGCCGCCGCTGTCGTGTTTTTGATTGCAGATTACATGGATGCTCCCAGGATCTTGTATTTCCGGCTGAGAGGCAACCTCCATGGATTCCTCCTAATACTGAAAATGCACCATGTGGGCCAAATTGTTTCAGATTGGTACTTAAGGCAGAAAAAATGTCGAAAGTCACATCTTCTACTCAGACTGATGTTGAAGACAAATCCTCAGGCAGTGTTCTATCTAGGAAAAAGTCTTCTGGTAAAAGGAGAATAAAATGCAGCCAAAGTGAAAGCGCTTCATCTAATGCTAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGGGATGCTACTTCGGCTTCCCACTCAGCTCCACCTAAAGCTAAGCCAGTAGGGAAAAGTGGAAAAGGTAAGAGAAACAGTAAACGAGTGGCAGAACGTGTTCTAGTTTGCATGCAGAAACGGCAGAAGAAAGCAGTAGCTTCTGATTCTGATTCCATTAGTGAAGCTCCTGACCGCCCATTGAATGATTTGGTTTCTGAACCACATGTCATGAGTGGGGAAGACAGCACAAGGAAAGAAGAGTTTGTGGATGAGAACATTTCTAAACAAGAAATGATAGATAATAAATCTTGGAAAGCTCTTGAAAAAGGGCTTTTAGAAAAAGGAATGGAGATTTTTGGCAAAAACAGCTGCTTAATAGCCAGGAATCTCTTTAATGGTCTAAAGACATGCTGGGATGTTTTCCGGTACATAAATTGTGAAGAAGGGAAGTTGTCTGGTTCTACTGGGGATGCCGTGAGTTCTCTTGTGGAAGGCTATTCCAAGGGTAATAATGATGTGAGAAGAAGATCAAAATTTTTACGGAGAAGAGGAAAAGTCCGTCGTTTAAAGTATACCTGGAAATCTGCCGCTTACCATTCAATCAGGAAAAGGATTACAGAGAGAAAGGATCAGCCCTGCCGACAGTACAACCCATGTGGATGTCAATCAGCTTGTGGAAAGGAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTACTGTGGGTGTCCCAAGAGTTGTAAAAACCGATTTCGTGGCTGTCATTGTGCAAAGAGTCAATGCCGAAGTCGCCAATGTCCATGCTTTGCTGCAGATAGGGAATGTGATCCGGATGTTTGTAGAAACTGTTGGGTCAGCAGCTGTGGCGATGGCACTCTTGGAATTCCTAGTCAAAGAGGGGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAAGGTTCTTCTTGGACGGTCTGATGTGTCTGGCTGGGGAGCATTCTTAAAGAATAGCGTTGGTAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCTCACAGGGAAGCAGACAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCATATCGAAAGGGTGATAAATTGAAGTTTGCAAACCACTCGCCTGTTCCAAATTGTTATGCGAAGGTTATTATGGTTGCTGGAGATCATAGGGTAGGAATATTTGCCAAGGAGCGGATTAATGCTGGGGAGGAGCTGTTTTATGATTACCGTTATGAACCCGATAGAGCTCCCGTTTGGGCTCGGAAACCAGAGGCACCTGGATCGAAAAAAGAAGACGGTGCTCCTTCAAGTGGCCGGGCAAAGAAGCTTGCTTAA 2598 0.4299 MASKSPPPPSRSSSSRSEPPLDPSPTKMEDTGPAVKEVLAVIESLKKQVAAKRIVSVKNRVEENRQKLAGITNQLWKSAAERKTCDVADSDKSLDLLTKRQQEAIDMHNGVCAGNDDGESNGNHGDDHGSTAVLLGSNVAVKNAVRPIKLPEVRRLPPYTTWIFLDRNQRMTEDQSVLGRRRIYYDQNGGEALICSDSEEELIDEEEEKREFVEPEDFILRMTIREFGLSEAVLESLAQCFSRKTSDIKARYETFCNEDNAGGDSKNGDAQDTSQSDNSFLEKDLEAALDSFDNLFCRRCRVFDCRLHGCSQDLVFPAERQPPWIPPNTENAPCGPNCFRLVLKAEKMSKVTSSTQTDVEDKSSGSVLSRKKSSGKRRIKCSQSESASSNAKNISESSDSENGPGRDATSASHSAPPKAKPVGKSGKGKRNSKRVAERVLVCMQKRQKKAVASDSDSISEAPDRPLNDLVSEPHVMSGEDSTRKEEFVDENISKQEMIDNKSWKALEKGLLEKGMEIFGKNSCLIARNLFNGLKTCWDVFRYINCEEGKLSGSTGDAVSSLVEGYSKGNNDVRRRSKFLRRRGKVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKECPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSSCGDGTLGIPSQRGDNYECRNMKLLLKQQQKVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPVPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPVWARKPEAPGSKKEDGAPSSGRAKKLA* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3810 865 SUPERFAMILY SET domain 589 836 IPR046341 -
Psa2g3810 865 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 461 863 IPR045318 GO:0006338|GO:0018024
Psa2g3810 865 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 19 459 IPR045318 GO:0006338|GO:0018024
Psa2g3810 865 Gene3D SET domain 615 833 IPR046341 -
Psa2g3810 865 ProSiteProfiles SET domain profile. 716 831 IPR001214 GO:0005515
Psa2g3810 865 Pfam SET domain 727 830 IPR001214 GO:0005515
Psa2g3810 865 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 865 IPR025778 GO:0031519
Psa2g3810 865 MobiDBLite consensus disorder prediction 1 33 - -
Psa2g3810 865 MobiDBLite consensus disorder prediction 350 434 - -
Psa2g3810 865 MobiDBLite consensus disorder prediction 1 21 - -
Psa2g3810 865 SMART set_7 716 837 IPR001214 GO:0005515
Psa2g3810 865 CDD SET_EZH 716 832 - -
Psa2g3810 865 ProSiteProfiles CXC domain profile. 601 701 IPR026489 -
Psa2g3810 865 MobiDBLite consensus disorder prediction 840 865 - -
Psa2g3810 865 MobiDBLite consensus disorder prediction 380 409 - -
Psa2g3810 865 Pfam CXC domain 653 684 IPR041355 -
Psa2g3810 865 SMART CXC_2 649 686 IPR033467 -
Psa2g3810 865 MobiDBLite consensus disorder prediction 840 858 - -
Psa2g3810 865 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 19 459 - -
Psa2g3810 865 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 461 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3810 Psa-Chr2 403311098 403319044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3810 705 834 C2H2 Transcription Factor Family AT2G23740 27.891 5.84e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Psa2g3810 SET 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3810 - K11430 gmx:100809840 1441.79