Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g3810 | ATGGCGTCCAAGTCTCCGCCTCCTCCTTCCCGGTCTTCGTCTTCTAGATCCGAGCCTCCTCTTGATCCTTCACCAACGAAAATGGAGGATACCGGTCCTGCAGTTAAAGAGGTGTTAGCGGTGATTGAATCTTTGAAGAAACAAGTTGCTGCCAAACGGATTGTTTCGGTCAAGAATAGAGTGGAGGAAAATAGACAGAAGCTGGCTGGTATCACTAACCAGCTCTGGAAATCAGCGGCGGAGAGAAAGACGTGTGACGTTGCGGATAGTGATAAAAGTCTGGATTTGTTGACTAAGAGGCAACAAGAAGCAATTGATATGCATAATGGTGTTTGTGCTGGTAATGATGATGGCGAGAGCAATGGTAATCATGGAGATGACCATGGTTCTACGGCAGTTCTTCTAGGATCTAATGTTGCTGTAAAGAATGCTGTCCGGCCTATCAAATTACCAGAAGTAAGAAGATTGCCGCCTTACACCACATGGATTTTTCTGGACAGAAATCAAAGAATGACAGAGGATCAATCGGTTTTAGGTCGGAGACGAATTTATTATGATCAAAATGGTGGTGAAGCACTTATTTGCAGTGACAGTGAGGAGGAACTAATTGATGAAGAAGAAGAAAAAAGAGAATTTGTAGAACCAGAAGATTTTATACTTCGCATGACTATCAGAGAATTTGGTTTATCTGAGGCTGTTTTGGAGTCACTGGCTCAGTGTTTTTCTAGAAAAACTAGTGACATTAAGGCCAGATATGAAACTTTTTGCAATGAAGACAATGCTGGCGGGGATTCTAAAAATGGAGATGCACAAGATACTTCTCAAAGTGACAATTCTTTTCTGGAAAAGGATCTTGAGGCGGCTCTTGACTCTTTTGACAACCTCTTTTGCCGCCGCTGTCGTGTTTTTGATTGCAGATTACATGGATGCTCCCAGGATCTTGTATTTCCGGCTGAGAGGCAACCTCCATGGATTCCTCCTAATACTGAAAATGCACCATGTGGGCCAAATTGTTTCAGATTGGTACTTAAGGCAGAAAAAATGTCGAAAGTCACATCTTCTACTCAGACTGATGTTGAAGACAAATCCTCAGGCAGTGTTCTATCTAGGAAAAAGTCTTCTGGTAAAAGGAGAATAAAATGCAGCCAAAGTGAAAGCGCTTCATCTAATGCTAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGGGATGCTACTTCGGCTTCCCACTCAGCTCCACCTAAAGCTAAGCCAGTAGGGAAAAGTGGAAAAGGTAAGAGAAACAGTAAACGAGTGGCAGAACGTGTTCTAGTTTGCATGCAGAAACGGCAGAAGAAAGCAGTAGCTTCTGATTCTGATTCCATTAGTGAAGCTCCTGACCGCCCATTGAATGATTTGGTTTCTGAACCACATGTCATGAGTGGGGAAGACAGCACAAGGAAAGAAGAGTTTGTGGATGAGAACATTTCTAAACAAGAAATGATAGATAATAAATCTTGGAAAGCTCTTGAAAAAGGGCTTTTAGAAAAAGGAATGGAGATTTTTGGCAAAAACAGCTGCTTAATAGCCAGGAATCTCTTTAATGGTCTAAAGACATGCTGGGATGTTTTCCGGTACATAAATTGTGAAGAAGGGAAGTTGTCTGGTTCTACTGGGGATGCCGTGAGTTCTCTTGTGGAAGGCTATTCCAAGGGTAATAATGATGTGAGAAGAAGATCAAAATTTTTACGGAGAAGAGGAAAAGTCCGTCGTTTAAAGTATACCTGGAAATCTGCCGCTTACCATTCAATCAGGAAAAGGATTACAGAGAGAAAGGATCAGCCCTGCCGACAGTACAACCCATGTGGATGTCAATCAGCTTGTGGAAAGGAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTACTGTGGGTGTCCCAAGAGTTGTAAAAACCGATTTCGTGGCTGTCATTGTGCAAAGAGTCAATGCCGAAGTCGCCAATGTCCATGCTTTGCTGCAGATAGGGAATGTGATCCGGATGTTTGTAGAAACTGTTGGGTCAGCAGCTGTGGCGATGGCACTCTTGGAATTCCTAGTCAAAGAGGGGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAAGGTTCTTCTTGGACGGTCTGATGTGTCTGGCTGGGGAGCATTCTTAAAGAATAGCGTTGGTAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCTCACAGGGAAGCAGACAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCATATCGAAAGGGTGATAAATTGAAGTTTGCAAACCACTCGCCTGTTCCAAATTGTTATGCGAAGGTTATTATGGTTGCTGGAGATCATAGGGTAGGAATATTTGCCAAGGAGCGGATTAATGCTGGGGAGGAGCTGTTTTATGATTACCGTTATGAACCCGATAGAGCTCCCGTTTGGGCTCGGAAACCAGAGGCACCTGGATCGAAAAAAGAAGACGGTGCTCCTTCAAGTGGCCGGGCAAAGAAGCTTGCTTAA | 2598 | 0.4299 | MASKSPPPPSRSSSSRSEPPLDPSPTKMEDTGPAVKEVLAVIESLKKQVAAKRIVSVKNRVEENRQKLAGITNQLWKSAAERKTCDVADSDKSLDLLTKRQQEAIDMHNGVCAGNDDGESNGNHGDDHGSTAVLLGSNVAVKNAVRPIKLPEVRRLPPYTTWIFLDRNQRMTEDQSVLGRRRIYYDQNGGEALICSDSEEELIDEEEEKREFVEPEDFILRMTIREFGLSEAVLESLAQCFSRKTSDIKARYETFCNEDNAGGDSKNGDAQDTSQSDNSFLEKDLEAALDSFDNLFCRRCRVFDCRLHGCSQDLVFPAERQPPWIPPNTENAPCGPNCFRLVLKAEKMSKVTSSTQTDVEDKSSGSVLSRKKSSGKRRIKCSQSESASSNAKNISESSDSENGPGRDATSASHSAPPKAKPVGKSGKGKRNSKRVAERVLVCMQKRQKKAVASDSDSISEAPDRPLNDLVSEPHVMSGEDSTRKEEFVDENISKQEMIDNKSWKALEKGLLEKGMEIFGKNSCLIARNLFNGLKTCWDVFRYINCEEGKLSGSTGDAVSSLVEGYSKGNNDVRRRSKFLRRRGKVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKECPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSSCGDGTLGIPSQRGDNYECRNMKLLLKQQQKVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPVPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPVWARKPEAPGSKKEDGAPSSGRAKKLA* | 866 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g3810 | 865 | SUPERFAMILY | SET domain | 589 | 836 | IPR046341 | - | |
Psa2g3810 | 865 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) | 461 | 863 | IPR045318 | GO:0006338|GO:0018024 | |
Psa2g3810 | 865 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) | 19 | 459 | IPR045318 | GO:0006338|GO:0018024 | |
Psa2g3810 | 865 | Gene3D | SET domain | 615 | 833 | IPR046341 | - | |
Psa2g3810 | 865 | ProSiteProfiles | SET domain profile. | 716 | 831 | IPR001214 | GO:0005515 | |
Psa2g3810 | 865 | Pfam | SET domain | 727 | 830 | IPR001214 | GO:0005515 | |
Psa2g3810 | 865 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 1 | 865 | IPR025778 | GO:0031519 | |
Psa2g3810 | 865 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Psa2g3810 | 865 | MobiDBLite | consensus disorder prediction | 350 | 434 | - | - | |
Psa2g3810 | 865 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Psa2g3810 | 865 | SMART | set_7 | 716 | 837 | IPR001214 | GO:0005515 | |
Psa2g3810 | 865 | CDD | SET_EZH | 716 | 832 | - | - | |
Psa2g3810 | 865 | ProSiteProfiles | CXC domain profile. | 601 | 701 | IPR026489 | - | |
Psa2g3810 | 865 | MobiDBLite | consensus disorder prediction | 840 | 865 | - | - | |
Psa2g3810 | 865 | MobiDBLite | consensus disorder prediction | 380 | 409 | - | - | |
Psa2g3810 | 865 | Pfam | CXC domain | 653 | 684 | IPR041355 | - | |
Psa2g3810 | 865 | SMART | CXC_2 | 649 | 686 | IPR033467 | - | |
Psa2g3810 | 865 | MobiDBLite | consensus disorder prediction | 840 | 858 | - | - | |
Psa2g3810 | 865 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE | 19 | 459 | - | - | |
Psa2g3810 | 865 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE | 461 | 863 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g3810 | Psa-Chr2 | 403311098 | 403319044 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g3810 | 705 | 834 | C2H2 Transcription Factor Family | AT2G23740 | 27.891 | 5.84e-10 | 61.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Psa2g3810 | SET | 2.2e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g3810 | - | K11430 | gmx:100809840 | 1441.79 |