Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3789 AGAGAAACTGGAGCATTGTGTGCAATGAAGGAAGCAGAAATATTTTCTGATGATCCAAAGTCTGCAGAGAGTATAAAGCAGTTAGAACAGGAAATTAAAGTTCTTAGCCATCTGAAACATCCAAACATTGTGCAGTATTATGGTAGTGAAATAGTAGAAGACAAGTTTTATATTTATTTGGAGTTTATCCATCCTGGTTCAATAAATAAATATGTTCGTGACCACTGTGGCGCGATAACAGAATCCGTTGTTCGGAATTTCACACGACATATTCTTTCGGGGTTGGCTTACTTGCACAGCAAAAAGACAATTCATAGGGATATCAAAGGGGCTAACTTGCTTGTTGATTCTTCTGGTGTTGTTAAGCTTGCTGATTTTGGGATGGCCAAACATCTAACTGGGCATTCTGCTGACCTGTCTTTGAAAGGAAGTCCATACTGGATGGCTCCAGAGCTTATGCAAGCAGTCATGCATAAAGACAACAACTCTGATCTAGCTTTTGCAGTTGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTCACGGGGAAGCCTCCTTGGAGTGAATACGAAGGAGCCGCAGCTATGTTTAAGGTAATGAAGGATACCCCTCCTATACCTGAAACATTGTCATCAGAAGGTAAAGATTTCTTGAGGCTTTGCTTTAAAAGAAATCCAGCAGAGCGCCCAACTGCTTCAATGTTATTAGAACATCGGTTTCTGAAAAACTTACAACATTCAGATCCTTCATCTTCCGCACATCTGTATAATGGAACAACCTCAATGGATAATTCCCATAGTCCCGGAGGGTTATATGAAAGCAAACCTGATCAGTTTTCTGTTGTCAGTGCACAGATTGCAAAAGGGAAATTTTGCACTGAGAGTGGCATAGCAGCGTCCCACTCGCTCTACTCTTGA 921 0.4061 RETGALCAMKEAEIFSDDPKSAESIKQLEQEIKVLSHLKHPNIVQYYGSEIVEDKFYIYLEFIHPGSINKYVRDHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGHSADLSLKGSPYWMAPELMQAVMHKDNNSDLAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSSEGKDFLRLCFKRNPAERPTASMLLEHRFLKNLQHSDPSSSAHLYNGTTSMDNSHSPGGLYESKPDQFSVVSAQIAKGKFCTESGIAASHSLYS* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3789 306 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 2 291 - -
Psa2g3789 306 SMART serkin_6 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3789 306 PRINTS Tyrosine kinase catalytic domain signature 60 73 IPR001245 GO:0004672|GO:0006468
Psa2g3789 306 PRINTS Tyrosine kinase catalytic domain signature 97 115 IPR001245 GO:0004672|GO:0006468
Psa2g3789 306 PRINTS Tyrosine kinase catalytic domain signature 169 191 IPR001245 GO:0004672|GO:0006468
Psa2g3789 306 PRINTS Tyrosine kinase catalytic domain signature 211 233 IPR001245 GO:0004672|GO:0006468
Psa2g3789 306 SUPERFAMILY Protein kinase-like (PK-like) 2 266 IPR011009 -
Psa2g3789 306 ProSiteProfiles Protein kinase domain profile. 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3789 306 Gene3D Transferase(Phosphotransferase) domain 1 1 270 - -
Psa2g3789 306 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 2 291 - -
Psa2g3789 306 Pfam Protein kinase domain 2 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3789 Psa-Chr2 402352565 402356083 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3789 2 259 MAP Kinase Kinase Kinase AT5G66850 84.291 6.52e-168 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa2g3789 Pkinase 1.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3789 - - cam:101502514 567.385