Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3779 ATGTCTCCGGAATCGGTGATGGACGGAGTGTATGATTCTCCGGTAGATATATGGGCTCTCGGTTGCACGGTCGTGGAGATTCTTACCGGAAAACCCGCATGGAACATGGGTTACGACACGAACATGATGAAGTTGTTGGTTCGAATTGGGGTTAGTGAAGAAGTACCATTGATTCCAGATGAAATATCAGAAGAAGCAAAAGATTTTCTTAAGAAATGTTTTGTTAGGGATCCACTAAAAAGATGGAGCGCTGAGATGCTTTTGAAACATCCTTTTATCTCGGATGATGGAACAGTTTCTTCCATTAAGGAGTCAACATTTTCACCAGCTTCTCCAATTACTCACTTTGAGTATTCAAACTGGAGTTCTTCTACCATTACAACATTGCCTTACAACTCGAGTGAAATGGAAGGTGATGCCAAACTATTAGATTGTTTGCCTGAAAAGAGGCTTGTACCACTAGTTACCAGTCATTGCTGTATGTTTGTTCGATCAATTTAG 501 0.4092 MSPESVMDGVYDSPVDIWALGCTVVEILTGKPAWNMGYDTNMMKLLVRIGVSEEVPLIPDEISEEAKDFLKKCFVRDPLKRWSAEMLLKHPFISDDGTVSSIKESTFSPASPITHFEYSNWSSSTITTLPYNSSEMEGDAKLLDCLPEKRLVPLVTSHCCMFVRSI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3779 166 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
Psa2g3779 166 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 128 - -
Psa2g3779 166 ProSiteProfiles Protein kinase domain profile. 1 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3779 166 SUPERFAMILY Protein kinase-like (PK-like) 1 131 IPR011009 -
Psa2g3779 166 Pfam Protein kinase domain 1 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3779 166 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3779 Psa-Chr2 401963713 401964213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3779 1 156 MAP Kinase Kinase Kinase AT5G67080 44.242 3.99e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa2g3779 Pkinase 5.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3779 - - aprc:113858661 164.081