Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3754 ATGGGTCTCTGCAATTCAAAACCCTCTTCAAACCCCACTCACTCCTCTCGCAAATTCAACACCATCGAACCAAACACCGTCACAGTTAGCGTCACTTCCGAACCTGAAACAAACTCCGTCAATGGCGGAAACCCTAACGAAACCGAAAATGGTAAAAGATCTCCGTTTTTTCCTTTCTACAGTCCGAGTCCGGCTCATCAGTTCTTCTCTAAGATGTCTCCGGCGGGGAAATTTTTCAAGCGGCCGCCGTCTCCGGCGAAGCATATAAAGTCGCTTCTTGCCCGGCGGCATGGCTTGGTGAAGCCTAATGACGCGCCGATACCGGAAGGGGGTGAGGAGGAGATGGTTGCGCTTGATAAGAATTTTGGATTCTCCAGGCATTTTGGAAGTAGATATGATGTTGGAGATGAGGTTGGGAGAGGACATTTTGGTTATACTTGTGCTGCTAAGTTGAAGAAAGGAGATCTTAAAGGTCAACAAGTTGCTGTTAAAGTCATTCCTAAAGCCAAGATGACGTCTGCTATTGCTATTGAGGATGTGAGAAGGGAAGTGAAAATACTGAAAGCTTTGAACGGGCATAAGAATCTAGTACGATTCTATGATGCTTATGAAGATCATGATAATGTCTATATAGTAATGGAATTGTGTGAAGGTGGAGAGCTGTTGGACAGAATATTATCAAGAGGTGGCAAATACCCAGAGGAAGATGCAAAAGCTATCCTTAGACAAATACTGAATGCTGCTGCATTTTGCCATCTACAGGGTGTTGTGCATCGTGATCTTAAACCGGAGAACTTCTTGTTTGCATCCAAGGACGAAAACTCAGAACTGAAGGCGATAGACTTTGGGCTGTCGGATTTTGTTAAACTAGACGAAAGGCTGAATGATATTGTGGGTAGTGCATACTATGTGGCTCCTGAAGTTCTTCATAGAGCTTATAGTACTGAGGCTGATGTCTGGAGTATTGGAGTGATTGCATATATTTTATTATGCGGAAGCCGTCCATTTTGGGCTCGGACCGAGTCTGGTATCTTTCGTACTGTATTGAAAGCTGATCCAAGTTTTGACGAACCTCCCTGGCCTTCTCTATCAAATGAGGCAAGGGATTTTGTTAAGAGATTACTCAATAAAGATCCACGGAAAAGAATGAGTGCAGCACAGGCATTAAGTCATCCATGGATAAAAAACTATGAGGATACGGAAGTACCTTTGGATATTTTAATATTCAAGCTCATGAAGGCATACATGCGTTCTTCTTCTCTACGAAAAGCTGCTTTAAGGGCCCTGTCTAAGACATTAACTGCTGATGAGCTGATTTATTTGAAGGAGCAGTTTGCACTTTTAGAGCCTAACAAAAATAGCACCATTAGCTTGGAAAATATAAAAACGGCCTTTATGGTAAATGCAACAGATGCTATGAAGGAGTCTCGTATTGCCGACTTTCTGGCATCACTTAATGCATTGCAATATAGAAGGATGGATTTTGATGAGTTCTGCGCAGCTGCGCTTAGTGTTCATCAACATGAAGCACTTGACCACTGGGAGAAGCGTGCACGTTATGCCTTTGACTTATTTGAAAAGGATGGAAACAAGGCCATAGTCATTGACGAATTAGCTTCGGAACTCGGGCTTGGTCCATCTATCCCGGTACATGCTGTTCTTCATGATTGGATTCGTCACACTGATGGGAAATTAAGCTTCCTTGGATTTGTGAAATTGTTGCATGGCCCATCAAGAAGTCTTGCAAAAGCTCAATAG 1758 0.4312 MGLCNSKPSSNPTHSSRKFNTIEPNTVTVSVTSEPETNSVNGGNPNETENGKRSPFFPFYSPSPAHQFFSKMSPAGKFFKRPPSPAKHIKSLLARRHGLVKPNDAPIPEGGEEEMVALDKNFGFSRHFGSRYDVGDEVGRGHFGYTCAAKLKKGDLKGQQVAVKVIPKAKMTSAIAIEDVRREVKILKALNGHKNLVRFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYPEEDAKAILRQILNAAAFCHLQGVVHRDLKPENFLFASKDENSELKAIDFGLSDFVKLDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRTVLKADPSFDEPPWPSLSNEARDFVKRLLNKDPRKRMSAAQALSHPWIKNYEDTEVPLDILIFKLMKAYMRSSSLRKAALRALSKTLTADELIYLKEQFALLEPNKNSTISLENIKTAFMVNATDAMKESRIADFLASLNALQYRRMDFDEFCAAALSVHQHEALDHWEKRARYAFDLFEKDGNKAIVIDELASELGLGPSIPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3754 585 Pfam Protein kinase domain 132 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3754 585 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 580 - -
Psa2g3754 585 ProSiteProfiles Protein kinase domain profile. 132 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3754 585 SMART serkin_6 132 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3754 585 Gene3D Phosphorylase Kinase; domain 1 125 220 - -
Psa2g3754 585 MobiDBLite consensus disorder prediction 1 51 - -
Psa2g3754 585 SUPERFAMILY EF-hand 422 576 IPR011992 -
Psa2g3754 585 SUPERFAMILY Protein kinase-like (PK-like) 129 422 IPR011009 -
Psa2g3754 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Psa2g3754 585 ProSitePatterns Protein kinases ATP-binding region signature. 138 164 IPR017441 GO:0005524
Psa2g3754 585 Gene3D Transferase(Phosphotransferase) domain 1 221 406 - -
Psa2g3754 585 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 39 580 - -
Psa2g3754 585 Gene3D - 413 576 - -
Psa2g3754 585 CDD STKc_CAMK 131 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3754 Psa-Chr2 399291011 399295390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3754 1 585 EF-hand Containing Proteins AT3G50530 70.912 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Psa2g3754 Pkinase 2.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3754 K00924 - tcc:18611088 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3754 2 399291011 399295390 Psa2g3754 2 399291011 399295390 ECH
Psa4g2051 4 157868096 157872558 Psa2g3754 2 399291011 399295390 PCT