Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3752 ATGCAAGATGTTGTTGAGTCTTGCAGGACTGATGTTGCTACCAATATTATCTTTGGCCTTGCCTTGATATATAATGTTGTTGTTGCTGCACTTGGAATGTTGAGTACCATAGAACCCAAATTAGCCATCGATGCATACAGTCCAATAAGTGACAATGCCGAAGGTATTTTTGCGATGGCTGGAATGAGTCACAAAATTCTTGAGAGAACCGATGCTCTTGATGCTGCAGGAAACACAAGTGTATCCAGTGGAAAGGGATTTGCTATTGGTTCTGCCACCCTTGTGTCTCTTGCACTTTTTGGTGCCTTTTTTTCTGCCATGACCATGAAGAGTGTTGGAAGTGCAACATTGAAGATGGTTGAGGAAGTCCGTGGGAAATTCAACGTGATTCCTGGATTGATGGAGAAAAATGCCAAACCTGACTATGTCATTTGTGTTACGATCTGCACCGACGCATCCATTAAAGAAATGATCCCACCAAATTCCCTTGTTACCCTAAACCCCCTTATTGTTGGGATCTGTTTTAATGTTGCGGGAAACATAACTGCTATTTCACCTAAGTAG 564 0.422 MQDVVESCRTDVATNIIFGLALIYNVVVAALGMLSTIEPKLAIDAYSPISDNAEGIFAMAGMSHKILERTDALDAAGNTSVSSGKGFAIGSATLVSLALFGAFFSAMTMKSVGSATLKMVEEVRGKFNVIPGLMEKNAKPDYVICVTICTDASIKEMIPPNSLVTLNPLIVGICFNVAGNITAISPK* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3752 187 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 103 178 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa2g3752 187 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 28 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa2g3752 187 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 22 105 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa2g3752 187 Pfam Inorganic H+ pyrophosphatase 103 178 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa2g3752 187 Pfam Inorganic H+ pyrophosphatase 14 103 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa2g3752 187 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 103 178 - -
Psa2g3752 187 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 1 28 - -
Psa2g3752 187 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 22 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3752 Psa-Chr2 399040161 399042169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3752 1 142 Primary Pumps ATPases AT1G15690 57.949 2.19e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3752 K23025 - bvg:104904547 234.187