Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3751 ATGTCGTCGTCAGCAAATTCGCCGTGTGCGGCGTGCAAGTTTCTCCGGCGAAAATGCACGACAGAGTGCGTGTTTGCACCGTATTTTCCACCGGATAACCCTCAAAGGTTTGCATACGTACACAAAGTTTTCGGTGCGAGCAACGTGGCGAAGCTACTTAACGAGCTTACGCAGAGTCAGCGTGAGGACGCCGTGAAGTCACTGGCTTACGAAGCTGAGGCGCGGCTTAGGGACCCCGTTTATGGCTGCGTTGGTCTTATCTCTCTTCTACAACATAAGTTAAGAGCGATTCAAGGTGAACTCAACAATGCTAAAAAGGAACTCGCAACTTATATTGGTCCTCAAGCTCTTCAGGGAATTCCTACGAGTATTCTTCAACCCCATAATATCCAAAGCAACCCGTTTTCAAACTCACTTTACCCATATAATGGTAACGTTTCGGGGGTGACAGCAGCTAATCAGATGGTGATTCGTGATCCACAACCTATGACACCTCAACATCAGATCTTGGAAGCTCAGCAATTGGCTGCCGCTGTTGCTGCTAGAGAGCAACAAGAGATATTTAGGACTTTTGAAAATCAACAACAGCAACAGCAGGAGTTTTTGAGGTTCAGTGGTGGGTTCGACGTGGACTCGGTTTCAAATTCTCCTTGTGGGTTCAACCAAGTATCTCCAGTTTCAGCTGCTTCTGTTGGTGTTGTTGCTGATCAATTGTCTCCTTCTTTGGCCTTGGGATCTTTTGACAATACTTATCACCACATGCAACAAACACAACAAGGACAAGAGTCTCATCCGCATCATCATCATAATCATCATCTTCCACTTCAAGCACAGCTATTGCTCCCTCCTCAGCAGAAGCAATCACAGCCACAAACTCAACATTCACCATTAGCACATCACCAACAACAGACGGAAAGCCAGGAGTGTAGGAGTGTTGGACTTGGTCCTTCGTGTTGA 957 0.4671 MSSSANSPCAACKFLRRKCTTECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELTQSQREDAVKSLAYEAEARLRDPVYGCVGLISLLQHKLRAIQGELNNAKKELATYIGPQALQGIPTSILQPHNIQSNPFSNSLYPYNGNVSGVTAANQMVIRDPQPMTPQHQILEAQQLAAAVAAREQQEIFRTFENQQQQQQEFLRFSGGFDVDSVSNSPCGFNQVSPVSAASVGVVADQLSPSLALGSFDNTYHHMQQTQQGQESHPHHHHNHHLPLQAQLLLPPQQKQSQPQTQHSPLAHHQQQTESQECRSVGLGPSC* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3751 318 MobiDBLite consensus disorder prediction 283 318 - -
Psa2g3751 318 Coils Coil 87 107 - -
Psa2g3751 318 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 284 - -
Psa2g3751 318 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Psa2g3751 318 PANTHER LOB DOMAIN-CONTAINING PROTEIN 36-LIKE 3 284 - -
Psa2g3751 318 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3751 Psa-Chr2 398895393 398899159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3751 3 233 AS2 family AT5G66870 54.032 9.58e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Psa2g3751 LOB 4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3751 - - mtr:MTR_5g017950 423.705