Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3742 ATGGATATACCGCCGATCATGCACGATAGTGACCGTTACGACTTCGTTCGTGATATCGGATCGGGGAATTTCGGCGTCGCCAGACTCATGACTGATAAACTCACCAAAGAGCTTGTTGCTGTCAAGTATATCGAACGCGGAGATAAGATTGATGAAAATGTGAAGAGAGAAATAATCAATCACAGGTCTCTAAGACATCCTAATATTATCAGGTTTAAGGAGGTCATTTTAACACCTACTCATCTGGCCATTGTAATGGAATATGCATCTGGAGGAGAAATGTTTGAACGAATCAGCAAAGCAGGGCGTTTTACTGAGGATGAGGCTCGCTTCTTCTTTCAACAACTCATATCCGGGGTCAGCTATTGTCATTCAATGCAAGTATGTCATCGAGATCTGAAGTTGGAAAACACGTTGTTGGATGGAGACCCGGCACTTCATCTGAAGATTTGTGATTTTGGATACTCCAAATCTTCGGTGCTTCATTCACAGCCAAAGTCAACTGTGGGAACTCCTGCTTATATTGCTCCAGAAGTACTTCTGAAGCAAGAGTATGATGGAAAGATTGCCGATGTCTGGTCATGTGGTGTAACCTTATACGTGATGCTAGTGGGGTCATATCCTTTTGAAGATCCCGATAATCCGAAGGATTTCCGGAAGACAATTCAGAGGGTTCTCAGCGTCCAGTATTCCGTACCAGACTTTGTTCAAATATCTCCTGAATGTCGCGACATTATATCAAGAATCTTTGTTTTCGACCCTGCAGAGAGAATCACCATTCCAGAGATAATGAAAAATGAATGGTTTCGAAAGAATCTTCCCGCTGACTTGGTGAATGAAAATATAACAGATAACCAATTTGAAGAACCGGATCAGCCTATGCAGAGTATGGATACGATCATGCAGATAATTTCAGAAGCTACCGTACCAGCAGTTGGGAGCTGTTATATAGACCAATTTATGCCTGATAACCCTGATACGGATGATGATATGGGCGAAATAGACTCTGACTATGAACTTGATGTAGATAGCAGTGGTGAGATTGTATATGCCATATAA 1059 0.4202 MDIPPIMHDSDRYDFVRDIGSGNFGVARLMTDKLTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGEMFERISKAGRFTEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGDPALHLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKIADVWSCGVTLYVMLVGSYPFEDPDNPKDFRKTIQRVLSVQYSVPDFVQISPECRDIISRIFVFDPAERITIPEIMKNEWFRKNLPADLVNENITDNQFEEPDQPMQSMDTIMQIISEATVPAVGSCYIDQFMPDNPDTDDDMGEIDSDYELDVDSSGEIVYAI* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3742 352 ProSiteProfiles Protein kinase domain profile. 13 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3742 352 SMART serkin_6 13 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3742 352 Gene3D Transferase(Phosphotransferase) domain 1 89 276 - -
Psa2g3742 352 PANTHER SERINE/THREONINE KINASE 7 346 - -
Psa2g3742 352 Gene3D Phosphorylase Kinase; domain 1 1 88 - -
Psa2g3742 352 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 7 346 - -
Psa2g3742 352 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Psa2g3742 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Psa2g3742 352 SUPERFAMILY Protein kinase-like (PK-like) 6 311 IPR011009 -
Psa2g3742 352 Pfam Protein kinase domain 13 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3742 Psa-Chr2 398395024 398398197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3742 12 273 CBL-interacting serine-threonine protein kinases AT5G25110 44.727 1.22e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Psa2g3742 Pkinase 1.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3742 K14498 - gmx:100783967 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3742 2 398395024 398398197 Psa2g3742 2 398395024 398398197 ECH
Psa4g2060 4 158448333 158451622 Psa2g3742 2 398395024 398398197 PCT