Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3728 ATGGCCATGGATGATTTCATCTTCAACACTCTCATTTCAACTATTCTCACCCTGTTAATTGGAGCCTTAATTTATCACAGAAAGAAAACACATAGAAAGAACTGCACTGCACCTCAAGCTGAAGGTGCATGGCCTATTATAGGCCATTTGCACCTCTTTGGAGCTAAGAAACTTACACACAAAACACTTGGAATGATGGCTGACAAACATGGACCAATTTTCACAATCAAACTTGGTTCATACAATGTTCTTGTACTAAGTAGCAGTGAAATGGCGAAAGAATGTTTCACTCTTCATGACAAAACATTCTCCACTAGACCCTTTGTTGCAGCCTCCAAGTTAATGGGATACAACTATGCCATGTTTGGTTTCACTCCTTATGGTCCTTATTGGCGTGAGATGAGGAAGTTAGCGACAGTCGAGCTTCTTTCGAATAACCGACTCGAACTGTTGAAGAACACGAGAGTATCTGAGATAGATGCTGCAGTGAGAGAGCTTTATAGGTTATGGACAGTAAAGGGTTGTCCGAGAGGAGGGATGTTGGTTGATATGAAGGAGTGGTTTGGCGATTTGACGCATAATATTGCTTTGAAAATGATGGGAGGGAAGCCATATTATGGAGGTGGTGAAGGTGAAGGTAGGAAGTATAAGGAAGCTATGAGAGATTGGGTGTGTTTGTTTGGTGTGTTTGTGATGTCTGATGCAATTCCATTTCTGGGTTGGTTAGATGTTAATGGTTATGAGAAGGCTATGAAGAGAACTGCGAAGAAATTGGATAGTTTGGCTGAAGGGTGGTTGGAGGAACATAAAAGGAAAAGAGGTTTGGGTGATGTTGGAAAGGAAGAACATGATTTCATGGATGTTATGTTGAATGTTTTGAAGGATTCTGAGATTTGTGGTTATGATTCAGATACAGTCATCAAGGCTACTTGCTTGAATCTGATTTTAGCAGGAAGTGACACCACAATGGTGACTCTAACATGGGCACTATCCCTACTTCTCAATCATCAAATGGAACTTAAAAAGGCACAGGATGAGTTGAACACTCATATTGGGAAGGACAGGAAGGTGGAAGAATCTGACATAAAGGACTTATTATACCTCCAAGCCATTGTCAAGGAAACATTGCGACTCTACCCACCGAGTCCAATTATCACCTTGCACGCAGCAATGAATGACTGCACTTTTTCATGTGGCTACCACATTCCTGCTGGTACACAGTTGATGGTGAATGCTTGGAAGATCCATCGAGACGGTCGTGTTTGGACTGATCCTCATGATTTCAAGCCTGAGAGGTTTTTGACAGGCCACAAAGATGTTGACATCAGAAGTCAGAACCATGAGCTTGTACCTTTTGGTTCTGGAAGGAGAGCATGCCCAGGAGCCTCATTGGCTTTGAGAGTGGTGCATTTGACTTTGGCTAGACTGCTACACTCATTCAATGTTGCTTCTCCCTCAAATCAAGCTGTAGACATGACAGAAAGCCCTGGACTCACAAATTTAAAAGCAACCCCACTTGAAGTTGTTCTAACACCGCATCTAGATGCCAACCTTTATGAAGACTAG 1566 0.4234 MAMDDFIFNTLISTILTLLIGALIYHRKKTHRKNCTAPQAEGAWPIIGHLHLFGAKKLTHKTLGMMADKHGPIFTIKLGSYNVLVLSSSEMAKECFTLHDKTFSTRPFVAASKLMGYNYAMFGFTPYGPYWREMRKLATVELLSNNRLELLKNTRVSEIDAAVRELYRLWTVKGCPRGGMLVDMKEWFGDLTHNIALKMMGGKPYYGGGEGEGRKYKEAMRDWVCLFGVFVMSDAIPFLGWLDVNGYEKAMKRTAKKLDSLAEGWLEEHKRKRGLGDVGKEEHDFMDVMLNVLKDSEICGYDSDTVIKATCLNLILAGSDTTMVTLTWALSLLLNHQMELKKAQDELNTHIGKDRKVEESDIKDLLYLQAIVKETLRLYPPSPIITLHAAMNDCTFSCGYHIPAGTQLMVNAWKIHRDGRVWTDPHDFKPERFLTGHKDVDIRSQNHELVPFGSGRRACPGASLALRVVHLTLARLLHSFNVASPSNQAVDMTESPGLTNLKATPLEVVLTPHLDANLYED* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3728 521 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3728 521 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3728 521 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3728 521 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3728 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Psa2g3728 521 PANTHER CYTOCHROME P450 CYP82D47-LIKE 3 519 - -
Psa2g3728 521 Pfam Cytochrome P450 38 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3728 521 Gene3D Cytochrome P450 26 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3728 521 PANTHER CYTOCHROME P450 82C3-RELATED 3 519 - -
Psa2g3728 521 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3728 521 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3728 521 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3728 521 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3728 521 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3728 521 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3728 521 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3728 521 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3728 521 SUPERFAMILY Cytochrome P450 43 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3728 Psa-Chr2 397894930 397898195 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3728 3 519 Cytochrome P450 AT4G31940 49.621 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3728 - - gmx:606549 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3728 2 397894930 397898195 Psa2g3728 2 397894930 397898195 ECH