Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3723 ATGAACTTTGTAATCATGATCACAGCAGTTTTCTTGTGGAGCATTTTATCGAACACAGCAAGTGCACAGAATAGCACAAACTGTTTGAAACGTTGTGGAGATGAAATTGTTCAATATCCTTTTGGATTCTCTGAAGGTTGTGGAATCAAATTGGACTGTTATGATAACATGCCTCGAATTGGTGAGTTTCTGATTCAGAATGTAACTGAAAAGAGTTTGTTAATCTACCTTCCTGCGAAATGCAACCGGAGTATGGAATCTATTCGACCGCTTTTCAGCAAGAATTTTGCTCCAACGAGGAATAATAGTTTTCTAGTTCAAGGTTGTTTTGCTTCGCTTGGTGGATGTGTGATTCCGGCTTCGAGTTTTGTTGGAAATCAGATTGAAGTTGAAAGCTGTGATAGTAAAAGTAGTAATATAAGCTGTTTTAATCAACAAGACGGAGAGGTTGATGTTTTGAGTTATGGGGAATTGAATAGAACTAAGTGTAACTATTTGTTCTCAGCTGTTTCTGTTGAACAGAATAAAGAGATTTCTTTGCAGTTTCAAGCGGTTGAATTAGGGTGGTGGGTTCAAGGTTCTTGTGATTGTTCTAACAATGCTACATGTTCGGAGGTGCATCTAGAAGGAAATGGTTCTGGATATCGGTGTCAGTGTTTGAATGGTTTCCGGGGAGATGGATTTGCCAAAGGCACCGGTTGCCGGAGAGCTCCAAGTTGCAGTGCTTCAACACTAACATCCGGAGGATGCGGGAGTGCAACCAAAATCGGTGTTGCTGTCGGAGTGATCGTAACTGGAGTTGTGATCGTGGCTGCCCTCATTCTTTTATGCTACTGTGCTAGGCGCCGTTTTACTTGGTTGAGAAAGCATACCAGAGTAAAGCGCCTACTACGTGAAGCTGCAGGAAACTCTATTGTGCCTCTCTACACTTACAAAGATATAGAAAAGGCCACAAATTCTTTCTCGGATAAACAGACACTAGGAACCGGGGCTTTCGGCACAGTCTACGCTGGAAAACTTCACAATGATGAGTTTGTTGCAATCAAGAAGATAAGACATAGAGACACTAACAGTGTTGATCAAGTAATGAATGAGATCAAGCTCCTTTCTTCGGTGAGTCACCCAAATTTGGTTCGCCTCCTAGGTTGCTGCATTGAAGAGGGAGAGCAGATACTTGTTTATGAATATATGCCAAATGGAACACTGTCTCAGCATTTGCAAAGAGAGAGAGGTAAAGGTCTTCCGTGGACGATACGACTCACCATTGCTTCTGAAACTGCTAATGCTATAGCTTATCTCCATTCGGCAATCTTTCTCACCGAATTTACCACACGAGAGACATAA 1344 0.4189 MNFVIMITAVFLWSILSNTASAQNSTNCLKRCGDEIVQYPFGFSEGCGIKLDCYDNMPRIGEFLIQNVTEKSLLIYLPAKCNRSMESIRPLFSKNFAPTRNNSFLVQGCFASLGGCVIPASSFVGNQIEVESCDSKSSNISCFNQQDGEVDVLSYGELNRTKCNYLFSAVSVEQNKEISLQFQAVELGWWVQGSCDCSNNATCSEVHLEGNGSGYRCQCLNGFRGDGFAKGTGCRRAPSCSASTLTSGGCGSATKIGVAVGVIVTGVVIVAALILLCYCARRRFTWLRKHTRVKRLLREAAGNSIVPLYTYKDIEKATNSFSDKQTLGTGAFGTVYAGKLHNDEFVAIKKIRHRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEEGEQILVYEYMPNGTLSQHLQRERGKGLPWTIRLTIASETANAIAYLHSAIFLTEFTTRET* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3723 447 Gene3D Transferase(Phosphotransferase) domain 1 395 439 - -
Psa2g3723 447 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 17 437 - -
Psa2g3723 447 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 437 IPR045274 GO:0007166
Psa2g3723 447 Gene3D Laminin 194 229 - -
Psa2g3723 447 ProSitePatterns Protein kinases ATP-binding region signature. 327 350 IPR017441 GO:0005524
Psa2g3723 447 Pfam Protein tyrosine and serine/threonine kinase 324 436 IPR001245 GO:0004672|GO:0006468
Psa2g3723 447 Gene3D Phosphorylase Kinase; domain 1 284 394 - -
Psa2g3723 447 ProSiteProfiles Protein kinase domain profile. 321 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3723 447 ProSiteProfiles EGF-like domain profile. 191 229 IPR000742 -
Psa2g3723 447 SUPERFAMILY Protein kinase-like (PK-like) 302 435 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3723 Psa-Chr2 397752733 397756630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3723 4 437 Receptor kinase-like Gene Family AT2G23450 49.888 1.11e-142 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Psa2g3723 PK_Tyr_Ser-Thr 1.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3723 - - gmx:100779130 583.178