Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3714 ATGAGAAGTTACAGCAACATTTCAACCAGGGATTTCATGTGGAACAATCTGACTGGCACAATACCAAAGGAAATCAGACACATTACATCGTTGAGACTCTTGCTCTTGAATGGAAATAAATTATCTGGCAGTTTACCGGATGAGCTTGGCGACCTTACGAATATGAATAGACTCCAACTAGATGAAAACCAACTGTCAGGTTCTGTGCCAAAATCGTTAGCGAATATGATCAACATTAGACACCTCCACATGAACAACAACTCGGAGAGAGATTGTATGTTAAGTATATCTCGTGGCCAGCTTTATATTGTGCCTAATGACAACGAAATCATTTCTTCTGTTTTGTCTACAAACTCATTTGCGATTGGTTCATGTTTAGGGATCTTAGCTGGAATCAGTTCACTAAGAGTAGAAAGAGAAAAACAGGCATTATTGCGCTATTATAATAGGAGCCGTTGCTGCTGTTTAGCAATAACCGCAATAACCATGCTCCTAATTTTTAGAAAATTCGAAATACAGCACTTGATTTCCAGGAAACGAACGTCCTCTAATGTTTGTATCAAAATAGATGGTGTGAAAGCATTCACTTTGAAAGAGTTGACTCACGCCACTAACAAATTTGATATCTCGACTAAAGTGGGGAAGGAGGTTATGGAAATGAGAAATTCATTACAAGGACAAAAAGAGTTCTTGACTGAGATTGAGCTTTTATCGAGGTTACATCATCGAAATCTTGTCTCTCTATTAGGCTACTGTAGCGAAGAAGGAGAGCAGATGCTGATTTATGAATTCATGCCCAACGGCACACTAAGGGAATGGATTTCTGAAACAAATCCGCATGTATCTTTCGAGAAGTGCTTATAA 864 0.3866 MRSYSNISTRDFMWNNLTGTIPKEIRHITSLRLLLLNGNKLSGSLPDELGDLTNMNRLQLDENQLSGSVPKSLANMINIRHLHMNNNSERDCMLSISRGQLYIVPNDNEIISSVLSTNSFAIGSCLGILAGISSLRVEREKQALLRYYNRSRCCCLAITAITMLLIFRKFEIQHLISRKRTSSNVCIKIDGVKAFTLKELTHATNKFDISTKVGKEVMEMRNSLQGQKEFLTEIELLSRLHHRNLVSLLGYCSEEGEQMLIYEFMPNGTLREWISETNPHVSFEKCL* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3714 287 Pfam Protein tyrosine and serine/threonine kinase 217 284 IPR001245 GO:0004672|GO:0006468
Psa2g3714 287 SUPERFAMILY Protein kinase-like (PK-like) 178 279 IPR011009 -
Psa2g3714 287 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 2 89 - -
Psa2g3714 287 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 156 278 - -
Psa2g3714 287 SUPERFAMILY L domain-like 13 93 - -
Psa2g3714 287 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 89 - -
Psa2g3714 287 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 156 278 - -
Psa2g3714 287 Gene3D Ribonuclease Inhibitor 1 96 IPR032675 -
Psa2g3714 287 Gene3D Transferase(Phosphotransferase) domain 1 157 287 - -
Psa2g3714 287 ProSiteProfiles Protein kinase domain profile. 170 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3714 Psa-Chr2 397114326 397116186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3714 16 272 Receptor kinase-like Gene Family AT2G37050 33.101 2.51e-32 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Psa2g3714 PK_Tyr_Ser-Thr 2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3714 - - ccaj:109788950 162.925