Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3705 ATGGGAATAGCAGGAGCATCTGTACCATTTGTTTCTTCTTCTTCTTCTTCTGTTATTTACTTGAAGAAACACCATAACCAAACCTTGAGATATTGTTCAACTTCAAATTCTATGTCACAAGATTATCAGCAAGCAATATTCGGATTCTCCTCGAATGGATTCGAGAGAGCGTCGCAGCAGCAGCAGCAGATCCAGAGGGATAAAATGAGGTTGCTGCAAGGATTTGATTCATCTGCAGCAGCAGCAGCAGCATTAGATGAAGAAGAAAGAGGTGGTGGTGGTGTTTATGAAACAGCAGGTATGTTATCAGAGATGTTTAATTTCGCTGATCCTTCAACCACTGCTGAATTATTAGAAACGGCGAGGTTTCGATCTTCGTCTTCTTCTTCATCAAGACATCATCATCATCATCAACAGCAGCAACAACAACAAACAACATCAGAAAACAATAACTGGTATGGTAATAACAGACAAGGGATGCAGCATCAGATTTCGAGTATTAATGTAGCAGGTGATTCAGCTGCTGCCATGCAACTTTTTCTGACAAACCCTTCTCAGTCTCATCAAACAACAACATCATCATCTTCTCCTCCACCTCCTCAAAATTCTTCAACTCTTCACATGTTACTCCCTAGCCCTCCCTCTAACAATTCACTACAAGGCTTTCCCAATTCTGGTAATAATTTTGGACAATTCACATGGGGTGGTGATTCTGTGGAAGGACAAGGACAAGGGCAAAGACAAGGCCAAGGTCTTTCATTATCATTATCTTCTTCATTGGAAGCTGCAAAAGCTGAGGAGGAACTGAGAATGGGAGGAGGAGGAGGAGGAGATAATAGTTTTCTGTATTACAATAATCAAGGTGTAGGTGGACCTTCTTCATCCTATCCGTACAAACCAAATCATCAAGCATTAAATTTACAATTACAAGGAGGAGGGACTAATATTAATGGAGGATACCAATTACAAACTCATCAGGGAGGATTTGGAAGTGTAGTTGTAAATGTTTTGAGAAACTCAAAATACATGAAAGCCACTCAAGAATTGCTTCAAGAATTTTGCAGTGTTGGAAGGGGTCAATTTATTAAGAAGAAGATTAAGTTCAATCCAAACCCTAATAATTCCTCCTCCAATGCTTCCGGTGATCCTATCATTCCTTCATCTTCATCAAAAGACAATCCTCCTCTCCCTTTGTCTGCTGCTGATAAGATTGAGCATCAAAGAAGGAAGGTCAAACTTCTATCCATGCTTGACGAGGTGGACAGAAGATACAATCACTATTGCGAACAAATGCAAGTGGTAGTGAACTCATTCGACGTAATGATGGGTTTTGGAGCAGCGATTCCATACACAGCACTAGCACAGAAAGCAATGTCTCGTCATTTCCGGTGTCTAAAGGATGCAATAACAGCAGAGGTGAAGAAAAGTTGTGAGATGTTAGGAGAGAAAGAAGGTGCAGGAGGAGGATTAACGAAAGGAGAGACACCTAGACTTAAGGCACTTGAACAAAGCCTAAGACAACAGAGAGCGTTTCATCAGATGGGTATGATGGATCAAGAAGCTTGGAGACCACAAAGAGGATTGCCTGAACGTTCTGTCAATGTTTTGAGAGCTTGGCTTTTTGAACATTTTCTACACCCGTATCCAAGTGATGCAGATAAGCATCTATTAGCACGACAAACTGGGCTATCACGAAACCAGGTATCAAACTGGTTCATAAATGCCAGGGTTAGATTGTGGAAACCTATGGTGGAAGAGATGTACCAACAAGAACTTAATGAAGCAGAGATGGCAGAAGAGAGAGAAAGAAACAACCAAAGCAATAGCAACAGTGACCACCAAACACAGACACCACCAACATCATCAACAGCAACAGATCAGCCACCACCACCACAACCACAACCACAACCAACCAGAAAAAGATCCGATATCAATGCACATGAAAACGACTCTTCACTGGTTGCAATCAATAGACAGCAAGACTTCTCGGAAAACCAAGCAATCCAATCCACCTCCACCACCGCAACCACCATCAACGTCACCACCGCCTCTGACATGGCTTTGGCTCCACCCTTCGATTCAGATCTGTCCCCACACAGATCGATGGTCATGGATGACACGTGTCGGTATGGCAGCTTAGTTGCAGAAGATTATGAGACAGCAGCCGATGTTAATGCTGACATTGGATCATCAACTCTTATCAGATTTGGGCCCACTAATGGTGACGTGTCACTCACTTTAGGGCTACGACACGCCGGGAATATGCCTGATAAAAACAACTTTCTCTATTAG 2292 0.4245 MGIAGASVPFVSSSSSSVIYLKKHHNQTLRYCSTSNSMSQDYQQAIFGFSSNGFERASQQQQQIQRDKMRLLQGFDSSAAAAAALDEEERGGGGVYETAGMLSEMFNFADPSTTAELLETARFRSSSSSSSRHHHHHQQQQQQQTTSENNNWYGNNRQGMQHQISSINVAGDSAAAMQLFLTNPSQSHQTTTSSSSPPPPQNSSTLHMLLPSPPSNNSLQGFPNSGNNFGQFTWGGDSVEGQGQGQRQGQGLSLSLSSSLEAAKAEEELRMGGGGGGDNSFLYYNNQGVGGPSSSYPYKPNHQALNLQLQGGGTNINGGYQLQTHQGGFGSVVVNVLRNSKYMKATQELLQEFCSVGRGQFIKKKIKFNPNPNNSSSNASGDPIIPSSSSKDNPPLPLSAADKIEHQRRKVKLLSMLDEVDRRYNHYCEQMQVVVNSFDVMMGFGAAIPYTALAQKAMSRHFRCLKDAITAEVKKSCEMLGEKEGAGGGLTKGETPRLKALEQSLRQQRAFHQMGMMDQEAWRPQRGLPERSVNVLRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELNEAEMAEERERNNQSNSNSDHQTQTPPTSSTATDQPPPPQPQPQPTRKRSDINAHENDSSLVAINRQQDFSENQAIQSTSTTATTINVTTASDMALAPPFDSDLSPHRSMVMDDTCRYGSLVAEDYETAADVNADIGSSTLIRFGPTNGDVSLTLGLRHAGNMPDKNNFLY* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3705 763 MobiDBLite consensus disorder prediction 595 643 - -
Psa2g3705 763 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 80 756 - -
Psa2g3705 763 Gene3D - 525 587 - -
Psa2g3705 763 MobiDBLite consensus disorder prediction 368 395 - -
Psa2g3705 763 CDD homeodomain 522 583 IPR001356 GO:0003677
Psa2g3705 763 MobiDBLite consensus disorder prediction 608 622 - -
Psa2g3705 763 Coils Coil 585 605 - -
Psa2g3705 763 Pfam Homeobox KN domain 539 578 IPR008422 GO:0003677|GO:0006355
Psa2g3705 763 SMART prehox3 331 471 IPR006563 -
Psa2g3705 763 MobiDBLite consensus disorder prediction 184 203 - -
Psa2g3705 763 Pfam Associated with HOX 336 470 IPR006563 -
Psa2g3705 763 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 80 756 - -
Psa2g3705 763 SMART HOX_1 522 586 IPR001356 GO:0003677
Psa2g3705 763 SUPERFAMILY Homeodomain-like 524 589 IPR009057 -
Psa2g3705 763 MobiDBLite consensus disorder prediction 121 147 - -
Psa2g3705 763 ProSiteProfiles 'Homeobox' domain profile. 519 582 IPR001356 GO:0003677
Psa2g3705 763 MobiDBLite consensus disorder prediction 623 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3705 Psa-Chr2 396701386 396708423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3705 10 569 Homeobox Transcription Factor Family AT4G36870 47.650 1.03e-140 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Psa2g3705 POX 4.2e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3705 - - gmx:100777243 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3705 2 396701386 396708423 Psa2g3705 2 396701386 396708423 ECH
Psa2g3705 2 396701386 396708423 Psa4g2112 4 165754978 165762907 ECH
Psa2g3705 2 396701386 396708423 Psa4g2112 4 165754978 165762907 PCT