Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3665 ATGATTGGTTGGTCGCGGATTGGGAAACCTTCTAATTTGTTATCTGCACTTCATCGTATCAAAGTTTTGGAGGCTTCAGCTAACTCTTGTCTTAAGGTGGATATCAGTTGGATTTTTGGATTGGCTATTTGTTGGACTATATGGGCTTGTCGGAATTCTATTATCTTTGAGGTGGTTTCGTTTGTCAATTTTGATGGGTTGGGCTCAAGCACCATGCTCCTTTATAAATTGTCACTCGCTTTTTCGTCACAGAATGTCGAAAACATGATAAGTGACAATGCAGATTCTGATACTAATGATGGTATTGTGTTTGATATTGATCCTAGTTTGCTTGTGGATTATGATAAGATAGTCATTGGTGACAGGATCGGCAAAGGGTCGTACTCTCTTGTATTCAAAGGATGGTATGAAGATCGCCCTATAGCCATTAAGGCTATACATAAAAAATGTAAAGCCAAATTTGAAAGGGAGGTAAAGGTTTTATCTAAGATTCAACATACAAATGTTGTCAAG 513 0.3782 MIGWSRIGKPSNLLSALHRIKVLEASANSCLKVDISWIFGLAICWTIWACRNSIIFEVVSFVNFDGLGSSTMLLYKLSLAFSSQNVENMISDNADSDTNDGIVFDIDPSLLVDYDKIVIGDRIGKGSYSLVFKGWYEDRPIAIKAIHKKCKAKFEREVKVLSKIQHTNVVK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3665 171 SUPERFAMILY Protein kinase-like (PK-like) 104 171 IPR011009 -
Psa2g3665 171 Pfam Protein tyrosine and serine/threonine kinase 118 171 IPR001245 GO:0004672|GO:0006468
Psa2g3665 171 ProSiteProfiles Protein kinase domain profile. 117 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3665 171 PANTHER PROTEIN KINASE ATN1-LIKE PROTEIN-RELATED 79 170 - -
Psa2g3665 171 PANTHER SERINE-THREONINE PROTEIN KINASE 79 170 - -
Psa2g3665 171 ProSitePatterns Protein kinases ATP-binding region signature. 123 144 IPR017441 GO:0005524
Psa2g3665 171 Gene3D Phosphorylase Kinase; domain 1 108 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3665 Psa-Chr2 393757125 393758632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3665 103 171 MAP Kinase Kinase Kinase AT5G40540 35.065 1.01e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Psa2g3665 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3665 - K16194 ccaj:109787878 83.9593