Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3599 ATGAATGACTTGATGACAAAATCGTTTCTAAGTTATGTAGAATTGAAGAAACAGGCACAGAAGGATTTTCAACAAGATCCTGACATTGAACTAGGGAACCTCAACCCAACACAAGACCCTAATCTCTCTCAGTTCTTCCAAGAAGTTGAAGCAATCAAGGTTGAAATGGAAGAGATCACCAATCTCTTATCAGATCTTCAGCAACTGAATGAAGAGACAAAATCAACTCACAGTGCAAAAGTTTTACGTGGGCTAAGAGACCGAATGGATTCCGATATGGTTGCCGTGCTTCGCAAGGCGAATGTAATCAAGGCAAGGTTAGAGGCTCTTCAAAAATCAAACATCGCGAATCGAAGCATGTCAGAATGCTACAGAGAAGGAAGCCCTATTGATAGAACAAGAGTGTCTGTCACAAGTGGTTTGAAGGTCAAGCTTAGGGACATGATGAATGATTTTCAGTCTTTAAGGGACAAGATTGTGTCGGATCATAAGGAAGATTTGAAGAGAAGGTACTATACTGTAACGGGGGAGGTACCTAGCGATGAGGTTATGGAGAAGATGATATCGGGGAGTCTCAAAGTTGAGTTTTTGGCTGGGAAAACGGATGCTGATATGGGTACTCAGGTTAGGCACGAGGCGGTGATGGATATTCAGAGGAGTTTGAATAAGCTTCATCAGGTTTTTCTTGATATGGCTATTTTGGTTGAGACTCAAGGAGAAAAAGTGGATAACATTGAAGATAATGTGGTGAATGCTGGTCACTACATTCATGGTGGAACTAATAATCTTTATTATGCAAGCCAGTTGAACAAGAGGAACAGGAAATGGATCTATTGGGTAATAGCTGTTTTGTTGATTGTAGTGCTGGTGTGTATCATTGCAATGGTGTCTTCTTGA 897 0.4091 MNDLMTKSFLSYVELKKQAQKDFQQDPDIELGNLNPTQDPNLSQFFQEVEAIKVEMEEITNLLSDLQQLNEETKSTHSAKVLRGLRDRMDSDMVAVLRKANVIKARLEALQKSNIANRSMSECYREGSPIDRTRVSVTSGLKVKLRDMMNDFQSLRDKIVSDHKEDLKRRYYTVTGEVPSDEVMEKMISGSLKVEFLAGKTDADMGTQVRHEAVMDIQRSLNKLHQVFLDMAILVETQGEKVDNIEDNVVNAGHYIHGGTNNLYYASQLNKRNRKWIYWVIAVLLIVVLVCIIAMVSS* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3599 298 PANTHER SYNTAXIN-112 3 294 - -
Psa2g3599 298 Pfam SNARE domain 240 290 IPR000727 -
Psa2g3599 298 Gene3D - 37 168 - -
Psa2g3599 298 CDD SNARE_syntaxin1-like 208 263 - -
Psa2g3599 298 CDD SynN 42 192 IPR006011 GO:0016020
Psa2g3599 298 Gene3D - 200 297 - -
Psa2g3599 298 SMART SynN_4 37 164 IPR006011 GO:0016020
Psa2g3599 298 Pfam Syntaxin 44 239 IPR006011 GO:0016020
Psa2g3599 298 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 204 266 IPR000727 -
Psa2g3599 298 Coils Coil 49 76 - -
Psa2g3599 298 PANTHER SYNTAXIN 3 294 IPR045242 -
Psa2g3599 298 SUPERFAMILY t-snare proteins 39 259 IPR010989 GO:0016020|GO:0016192
Psa2g3599 298 SMART tSNARE_6 199 266 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3599 Psa-Chr2 390038400 390040190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3599 1 298 SNARE and Associated Proteins AT2G18260 56.678 3.53e-128 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3599 K08486 - gmx:112997615 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3599 2 390038400 390040190 Psa2g3599 2 390038400 390040190 ECH