Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3593 ATGGAGAAGACGCGACTAGATAACTTATTTCCTCTGACTCCAAGTTCAATATTCTCGACCAAGAAGGGACGCAGTGGATACGAACCATCAGACACAGAGACGGAGTGGCAAGACACTCCGCGTCATGAACGAGGAAGAAAGAACATGACTTTGAGTCCTGAAGAAACAAAAACTATGTCTCATAGTAACAAAAGTCCAATGATACTCCACAAGAGACACCCTTCGAGATTTGAATTTGAAGTATCGTCGTCACCTTCAATAACAGGCTCAGTTCTTAACCAACCAAGAAGACGGCATCTCAGCAAATCACCCTATAAGCTACGCATAGCACGAGACGGTGGTAATGATGATGAGGACACTTCGTTATCATACATGTCTGGTTTGAACTCGAGTAGAAATATAAGTCCTTTGCCAAGACCCGACTTTGGAAGAACAGTGTCTCCTTATAACAGAAATCATGAGCAAAGAACACCTTCTAACGAAAACAGAAAAGCGAATTCAGGGCTTCTGGAAGTGGATAGAGCGAGCACAAAACCAAACTACAGGAGAGCAGTAACTGCTCCAAGATTGAGAGACCAACAACAAACATTGCAAAACACAGCGAGAATTCTGAAACAAAGGGAAAAATCTCCCTTCAAAACAGGTTCAGTTAGAGAAAGAGAAGTCAATGAAATGATAGCACAGGTGAAGCTATCGAAAAATCCTACCGATGACTATTCATCAGCACTGGAAAGTACAGACTCAATTCAACCAGGTGATCTTTTCTTTTCCCGCGAATGCAATGCCTTGCAAGCGAAGAATCCTTCATTGCCTAAAAAAGTTGAACAATATGCATATTTTAGTCCAAGACCAGTGATCACCACCATTAACAACCCACCTGAAAGTGGTAAATTCAATACGAATATGAATAAAAGAACCTCTTCCAGTACTATGTTGTTGTCTCGAACAACGATGGGACCATCAATCAGAAAGGGAAGTGGAACTGGAAAGTCTAGCGCTAAATCTAGCGTAAAAAGTGATGCTAGTGCAAAAACAACTGAAAGCATGAGGAAATTCACATCCAACAGAAAAAAGAACCAGAAAGATGCATGGTTTGCCTGCATGATGAGAACAGGAAACTGTAGAACTTCAAGAAAATCACCTGAACGTAGACCGATTGACGAAGCTTCCTTGATCGAGAGGGCAACAATTGTGGAAAGCATTCCACAATTCTGGGCTGATAAACATCAACCAGCTTCACTCAATGGCTTCATTTGCAACAAACAAGAAGCTCAACTTCTCAAGGAACTAGTGTCACAGGGCTCTTGTCCTCACATTTTGCTCAAAGGACCCTCTGGTTCGGGGAAACGAGATCTAGCAATGACTTTTCTTAAAGAAATATACGGCGATTCATGTTGTAAACTGTCACATGATCTAAGACATTTCCCTATTCAGGACAAAAGGACTGTGAAAGTATCGGTTCCAATCACGTCCAGTCCTCATCACATGGAGCTCAATGTAAATTCAGAACCAAATGCTAAATATGCTTTGATGGGACTAATCAAAGAAATTAGCAATATATATGCAATTGCCCCTGAAGTAAGCAATGTGAATTTCAAGTCCGATTATAAAGTAATAATTCTTTACGAGGTCGACAAAGCTGTAGAGAACATTCAGCACTTGATCAAATGGATCATAGACCGTTATTCAGATATATGCAAATTAGTTCTATGCTGTGAAGATGATGACAATATTATTGCACCCGTGAAAAACCGGTTCAAAGTTATCAATGTTGATGCTCCTCAAACTCATGAAATTATTGAGGCTCTTACTCAGATAGCAAATAAAGAGGAAATTGATCTATCCATGAGTTTTGCCATGAAGATTGCTACAAAATCTAAGCAGAACCTCAGAGAAGCAATATTGGCTCTTGAAGCCTGCAAAGCACACAACTATCCATTTTCAGAAGAACAACCGATTCCAGTTGGATGGGAGAAGATTGTAATAGAACTTGCTGTAGAGATCCTAACTGATCCATCGTTTTCACGATTACTCTCAATAAGAGGGAAATTTCAAATGCTTCTCCTGGATTTTGTCCACCCAAAATTGATTCTCCTGAAACTTGTGGAGGAGCTTCTAAGAAGAGTTGAGACCGGCCTAAAAAGGGAGCTCTACTACTGGCATGCTTATTATGATAGAAGACTTCCACCAGGAACAACAGCTTTACTAAAATTAGAAGAATTTGTGGCCAAGTTCATGAGCATGTGCAGAAAAAGCTCAGGCAGTAGACAGTATGTGTAG 2280 0.4044 MEKTRLDNLFPLTPSSIFSTKKGRSGYEPSDTETEWQDTPRHERGRKNMTLSPEETKTMSHSNKSPMILHKRHPSRFEFEVSSSPSITGSVLNQPRRRHLSKSPYKLRIARDGGNDDEDTSLSYMSGLNSSRNISPLPRPDFGRTVSPYNRNHEQRTPSNENRKANSGLLEVDRASTKPNYRRAVTAPRLRDQQQTLQNTARILKQREKSPFKTGSVREREVNEMIAQVKLSKNPTDDYSSALESTDSIQPGDLFFSRECNALQAKNPSLPKKVEQYAYFSPRPVITTINNPPESGKFNTNMNKRTSSSTMLLSRTTMGPSIRKGSGTGKSSAKSSVKSDASAKTTESMRKFTSNRKKNQKDAWFACMMRTGNCRTSRKSPERRPIDEASLIERATIVESIPQFWADKHQPASLNGFICNKQEAQLLKELVSQGSCPHILLKGPSGSGKRDLAMTFLKEIYGDSCCKLSHDLRHFPIQDKRTVKVSVPITSSPHHMELNVNSEPNAKYALMGLIKEISNIYAIAPEVSNVNFKSDYKVIILYEVDKAVENIQHLIKWIIDRYSDICKLVLCCEDDDNIIAPVKNRFKVINVDAPQTHEIIEALTQIANKEEIDLSMSFAMKIATKSKQNLREAILALEACKAHNYPFSEEQPIPVGWEKIVIELAVEILTDPSFSRLLSIRGKFQMLLLDFVHPKLILLKLVEELLRRVETGLKRELYYWHAYYDRRLPPGTTALLKLEEFVAKFMSMCRKSSGSRQYV* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3593 759 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 207 758 - -
Psa2g3593 759 MobiDBLite consensus disorder prediction 149 166 - -
Psa2g3593 759 CDD AAA 420 460 - -
Psa2g3593 759 MobiDBLite consensus disorder prediction 317 357 - -
Psa2g3593 759 MobiDBLite consensus disorder prediction 26 51 - -
Psa2g3593 759 Gene3D - 403 594 IPR027417 -
Psa2g3593 759 MobiDBLite consensus disorder prediction 1 63 - -
Psa2g3593 759 MobiDBLite consensus disorder prediction 317 349 - -
Psa2g3593 759 SUPERFAMILY post-AAA+ oligomerization domain-like 656 748 IPR008921 GO:0003677|GO:0006260
Psa2g3593 759 MobiDBLite consensus disorder prediction 9 25 - -
Psa2g3593 759 Gene3D - 656 749 - -
Psa2g3593 759 MobiDBLite consensus disorder prediction 149 170 - -
Psa2g3593 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 403 642 IPR027417 -
Psa2g3593 759 Gene3D - 596 653 - -
Psa2g3593 759 PANTHER OS02G0704966 PROTEIN 207 758 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3593 404 748 Core DNA Replication Machinery Family AT5G27740 38.506 3.63e-78 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3593 K10756 - gmx:100795321 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3593 2 389700534 389703766 Psa2g3593 2 389700534 389703766 ECH