Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3577 ATGATGTTTTCTTCTCCAAGAGAAATGCCTTCACCATCTTCAATTTTCTCAGCTTATGCATCCATGACAGCTTCCATCATGCTACTTCGTTCCATGGCACATGAACTCATTCCTCAACCAATTCGTGGCTACCTTTTCAACACCTTCCGCTACCTCATAAAACCACGCTCCCCCACACTCACACTCATCATAGAAGAATCAACAGGCATAACACGTAACCAAGTCTACGATGCTGCAGAATCTTATCTCTCAACAAGAGTCACTCCTGAAAACGAAAGACTCAAAATCAGCAAAGTCCCAAAAGAGAAAAAACTCACAATCCGTTTAGAAAAAGGCGAAAAATTAACCGATACATATAACGGGTTTACTCTCAAATGGAGATTCATCTGTGCGGAAACGGAGAAAAACAGTGCAAACGATATTCACAACAGTAATAACAGTATCTCTGTTAGATCAGAAAAACGATATTTCGAACTGAGTTTTCACAAAAAGTATAAGGAAATAGTTCTGGATTCCTATCTTCCTTTCATTCTTGATAAAGCTAAAGAAATGAAAGATGAAGAAAGGGTGTTAAAAATGCATACATTAAACACCGCTTATTGTTACAGTGGTGTGAAATGGGACTCTATAAACCTCGAACACCCTTCAACCTTTGAAACCCTAGCTATGGAACCTGAAATGAAGAATGCTATTATAGAAGATTTGAACATGTTTGTGAAGAGGAAAGATTTTTATAAGAAAGTTGGAAGAGCATGGAAACGTGGTTATTTATTGTACGGTCCTCCTGGTACTGGAAAATCTAGTTTGATTGCTGCTATGGCAAACTATTTGAAGTTTGATATCTTTGATCTTCAACTTGGTAACATTGTTAGAGATTCAGATCTTAGAAAGTTGCTTCTTGCTACTGCTAATAGATCTATTTTGGTTATTGAAGATATTGATTGCAGTGTTGATCTTCCTGAGAGGAGACATGGTGAAGGACGTAAACAAACTGATATACAGGCTCATGTTGATTCTGATGGATGGATGCAGTTGACATTATCTGGATTATTAAACTTCATAGATGGATTATGGTCAAGTTGTGGAGATGAAAGAATAATCATATTTACAACCAACCACAAAGAAAGATTAGATCCAGCTCTTTTAAGGCCAGGAAGAATGGACATGCACATTCACATGTCCTATTGTTCTTATGAAGGTTTCAAAATTTTGGCCTCAAATTACTTAGAAATTTCCCATGATAACAACCCTTTGTTTGGAGAGATTGAAGGACTCATTGAAGACATACAGATAACACCGGCGCAAGTGGCCGAGGAACTGATGAAGAGCGAAGACGCCGATGCGACGCTTGAAGGGTTTGTCAAGTTACTCAAGAGGAAGAAGATGGAAGGTGATGTGTGTGAGAACAATAACAAAAGAGAAAATCAAGAGAAGCAATGTAAAAAGAGGAAGGTTAGTTGTAAGCAAAAAAGAGGTGGTGGGAATAGCAAGAGCAATGTTGGTGTTACTCAAAGAAGGACTAGAGGGATTATTAAAAGAGGTTCTAGTTTGTGA 1554 0.3797 MMFSSPREMPSPSSIFSAYASMTASIMLLRSMAHELIPQPIRGYLFNTFRYLIKPRSPTLTLIIEESTGITRNQVYDAAESYLSTRVTPENERLKISKVPKEKKLTIRLEKGEKLTDTYNGFTLKWRFICAETEKNSANDIHNSNNSISVRSEKRYFELSFHKKYKEIVLDSYLPFILDKAKEMKDEERVLKMHTLNTAYCYSGVKWDSINLEHPSTFETLAMEPEMKNAIIEDLNMFVKRKDFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIFDLQLGNIVRDSDLRKLLLATANRSILVIEDIDCSVDLPERRHGEGRKQTDIQAHVDSDGWMQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSYEGFKILASNYLEISHDNNPLFGEIEGLIEDIQITPAQVAEELMKSEDADATLEGFVKLLKRKKMEGDVCENNNKRENQEKQCKKRKVSCKQKRGGGNSKSNVGVTQRRTRGIIKRGSSL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3577 517 Pfam ATPase family associated with various cellular activities (AAA) 257 394 IPR003959 GO:0005524|GO:0016887
Psa2g3577 517 SMART AAA_5 252 397 IPR003593 -
Psa2g3577 517 CDD AAA 253 395 - -
Psa2g3577 517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 445 IPR027417 -
Psa2g3577 517 PANTHER BNAA10G17020D PROTEIN 8 476 - -
Psa2g3577 517 Gene3D - 392 465 - -
Psa2g3577 517 MobiDBLite consensus disorder prediction 470 517 - -
Psa2g3577 517 PANTHER BCS1 AAA-TYPE ATPASE 8 476 - -
Psa2g3577 517 ProSitePatterns AAA-protein family signature. 365 383 IPR003960 GO:0005524|GO:0016887
Psa2g3577 517 Pfam Domain associated at C-terminal with AAA 37 129 IPR025753 -
Psa2g3577 517 MobiDBLite consensus disorder prediction 491 517 - -
Psa2g3577 517 Gene3D - 205 391 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3577 Psa-Chr2 389254124 389257538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3577 230 397 Calmodulin-binding Proteins AT3G56690 27.273 4.16e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3577 - - gmx:100789621 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3577 2 389254124 389257538 Psa2g3577 2 389254124 389257538 ECH