Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3572 ATGGTCAATTCTATAAACTTTTTCTTGCTTTTTTCTCTTCTAGTCTTTGCTCCTTTCTGTCACTGTAAAACTAAAGTAGGAGATTTCCTCTACCCTCAATTTTACGACGGTTCGTGTCCGAGAGTTGAGGAGATTGTTAAGTCTGTAGTTTCCAAGGCTGTCGCTAAAGAACCTCGCATGGCTGCTTCGTTGCTGAGACTGCATTTTCATGACTGTTTTGTCAAGTTCAAGCTTAAGGGTCTTAACATTGTTGATCTAGTTGCTCTATCTGGTAGTCACACTATAGGTGATTCAAGATGCACTAGCTTTAGACAAAGACTCTACAACCAAACTGGGAATGGCAAGTCAGATTTCACTCTTGACCAAAACTATGCAGCTCAGTTGCGCGCTCAGTGCCCGAGATCTGGCGGAGACCAAAATCTATTTGTCCTAGACTTTATCACCCCGGTAAAATTCGACAACAACTACTACAAGAACTTATTGGCCAACAAGGGTCTGTTAAGTTCTGATGAAGTTCTGTTGACAAAGAATCAAGTATCTGCCAATTTAGTGAAGACTTATGCAGCAAGAAATGATATTTTCTTTGATCAATTTGCCAAGTCTATGGTTAAGCTGGGAAACATTACTCCTTTAACAGGTTCAAGGGGTGAAATCAGGAAGCACTGCAGAAAGATTAACACATGA 684 0.405 MVNSINFFLLFSLLVFAPFCHCKTKVGDFLYPQFYDGSCPRVEEIVKSVVSKAVAKEPRMAASLLRLHFHDCFVKFKLKGLNIVDLVALSGSHTIGDSRCTSFRQRLYNQTGNGKSDFTLDQNYAAQLRAQCPRSGGDQNLFVLDFITPVKFDNNYYKNLLANKGLLSSDEVLLTKNQVSANLVKTYAARNDIFFDQFAKSMVKLGNITPLTGSRGEIRKHCRKINT* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3572 227 ProSiteProfiles Plant heme peroxidase family profile. 29 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3572 227 ProSiteProfiles Plant heme peroxidase family profile. 75 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3572 227 SUPERFAMILY Heme-dependent peroxidases 30 226 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa2g3572 227 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g3572 227 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g3572 227 ProSitePatterns Peroxidases proximal heme-ligand signature. 85 95 IPR019793 -
Psa2g3572 227 Gene3D - 33 74 - -
Psa2g3572 227 PANTHER PEROXIDASE 72-RELATED 74 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g3572 227 PANTHER PEROXIDASE 72-RELATED 5 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g3572 227 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3572 227 PRINTS Haem peroxidase superfamily signature 81 98 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3572 227 PRINTS Haem peroxidase superfamily signature 145 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3572 227 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Psa2g3572 227 Gene3D Peroxidase, domain 2 75 205 - -
Psa2g3572 227 PANTHER PEROXIDASE 5 74 - -
Psa2g3572 227 PANTHER PEROXIDASE 74 226 - -
Psa2g3572 227 Pfam Peroxidase 75 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3572 227 Gene3D - 206 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3572 Psa-Chr2 389073290 389074635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3572 69 226 Peroxidase AT5G66390 67.722 1.01e-75 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3572 K00430 - gmx:100788562 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3572 2 389073290 389074635 Psa2g3572 2 389073290 389074635 ECH
Psa2g3572 2 389073290 389074635 Psa4g2242 4 180083122 180084637 ECH