Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3559 ATGGACAATAAACACTGGGTTGGAATTAAAGTGGGTTGGAAAGATCCTTTCATCTCTCACCTTATGTTTACAACTGACCTCTTGCTCTTTGGCCAGGCAACTGAAAGTCAAATTGCTAACATGATGGAAGTTTTAGATGACTTATGTGCTGCTTCTGGTCAACTTATAAGCAAGGAGAAAACTAGAATTATGTTCTCGTCCAACACTCCAGTAGGAATTCGTAAGAATATCGCTACCTTGTATGGTTTTAGAGAAGTTGAAGATCTTGGTTTGTATTTGGGGGTTCCTCTCTCCGGAAAGAGTCCTAGGATCAACAACTATCAGTTTCTCATGGACAAGGTTTGTGCTAAGCTAAGCCACTTGAAGTGTAATCAGTTGTCCTTTGATGGAAGGGTTACGCTTTCAAAATTAGTGATTGAAGCTCTTCCTACTTATTCAATGATGAGTAGTAAGAACTTCGCTAGAGAATGGGCGACTAACAGCAAGTTTATTCAGTGGGAAATTGGTGATGGGGCTTCGATTAAAGCTTGGGATGACTATTGGGTGCAGGTTGGTCGTAAGCTTCACAATGTTATGTTTAATCATGGCTTGTCTGCAACTGACACTATGCTCATTGACTTGGTTAATATTAACGACAATTGGAATTTGAGAGTGATTAAGGATAACATTCTTGGGCCGATTGTGCAGCAAATTCGTGCAATAGCTCCTCCCCATAGGAATAGCTGGCATAAAGATTGTTGCATTTGGAGCGGAACTGCTAATGGCTTGTTTCCCATAGCAAGTTCTTACGAGTTGCGTGACACTTCCATCCATGTTGCTCATGCAAGGAAGTGGAGTAGAATTTGGAAGCTTGTTGTCCCTGAGCGAATTTGTTTCCATGTGTGGATGATCCATATTCAAGGTTTGAAAACTAATCAGCTTCTTTTTCAGCGTAAGCTTCGGAATTCATTTTGTGGCAATTGTAATGGTGTTGTTGAGTCTCTTCTTTATTGGCGAAATCAATTTATTCACACTCCGAATTTTGTATTTCATGACTCTTTATCTGAAGTGGTTAAGCTTTTTGTTGCTCAATACAACAGAGTTATGTTGCTTCAAAAGAAGGTGTTGCGTATTGGGCAGAATGGGCATCATGTGGGGTGGACCCCAGCTGCTGAAGAATGGGCGATTATAAATGTTGATGGGGTTGTTAGTATTAGAGGCATCTCTAATGGTGTCCGTACTTTGCTAAGTTGTGGGGGAGTTCATGAAGGAATTCAGTTGGCTAAGAAATTCAATCTTCCCAAAGTCGAGTTTCAGGTTGATAATGTGCAAGTAGTCAAATATATATCTACTTCCAAGCCTCTTAGAAAGTTTGGTCTTAGCTTGGTTCGCAAAATCCAAGAAGATCTCAAGAGCCTCGATAATTATCATTTTAAGCATATTCTTCGCGTAGAAAATATGTGTGCGGCCCTTTCGTTAAGAGTGGTAGGTGGAGGTGGTGTGACTCGAGTGATGGGGTTTATCATGTGTGTTCCTCCTACTCTTGTCTTCTGGCCCGAGTGTTTCCCCCAGGTCGTCAAGCCTCTCCCGCATAGTGTATGTGTGGGAATAGTTGTGTTGTTTATGAGTTGGTGGTTTTTGATGAAGAAGGAGAATAATAGTGAAATTAAAATTCCAAAAGGGAATTCAGGTTGGCCTTTAATTGGAGAAACTCTTGATTTCGTTGCTTCTTGTTATTCTTCTCGCCCTGTCACCTTCATGGAAAATCGCAAGTCTATCTATGGGGATGTGTTTAAGACAAACATTTTGGGAAGCAATTTAATCATTTCAACCGACCCAGAAGTGAACAAGGTGATTCTGCATAATCAAAAGAACATATTCATCCCTGCTTATCCAAAATCAATTAAAGAATTAATGGGAGAACACTCCATACTCCAATTGAATGGTAACAAGCACAAGAAACTGCATTCAATCATTGCAGTGTTTCTTAAATCTCCACAATTTAAAGCAAGAATCACCACAGATATTGAACATTCTGTCAAACAACGCTTAGCTTCTTGGACCAACAAAACAATATACATTCAAGATGAAGTCAAAAAGATTACATTTCCAATTTTGAATAAAGTTCTGATGAGTGTTGGTCCTGGTGAAGATTTGGACTTGTTGAAAAGAGAATTTGAAGTATTCATCAAAGGGTTGATTTGCTTACCCATCAAGTTTCCAGGAACAACACTATACAAATCCTTGAAGGCTAAGGAAAGGATGATGAAGATGGTGAGGAAGATAGTGGAGGAAAGAAAGAACCAAATAGTGGATAATAATGAAGTTAATGATGTTGTGGATGTACTATTAAGGGGCAAGGATGAGTTATCCCAATCTAGTAGCTCAAGTTCAAACTTGGAGTTGGAAATGATAAGCCAAAACATCATAGAGATGATGATTCCAGGGGAAGAGACCCTTCCTACAGCCATGACCTTGGCCCTTAAATTCCTATCTGACTCACCTCTTGCTCTATCCAAACTTATGGAGGAGAACATGGAACTGAAGAAGCAGAAGACTGATAACTCAGAAGATTATAGATGGACTGACTACATGTCCCTACCATTTACTCAGAATGTCATAAGTGAAACTCTTAGAATGGCCAATATAGTCAATGGAATTTGGAGGAAAGCAGTCCAAGACGTAGAAATCAAAGGGTATCTAATTCCAAAGAATTGGAGTGTTATGGCATGTCTTATCTCTGTTCACTTGGATCCAAAGAACTATGAAAACCCTTTTAAGTTTGATCCATGGAGATGGGAGAAAATTGAAGTTTTGGCTAGTAACATCCGCTTTGCACCATTTGGTGGTGGACATAGACTATGCCCTGGGTTAGAACTTTCTAGGCTAGAGCTCTCTATTTTCCTTCACAATCTTGTTACTACATACAGATGGGTCGCTGAGAAGGATGAAATAGTATACTTTCCAACTGTTAAGATGAAGAAGAAGCTCCCAATTAGAGTCCAACCCATTAACGCTTGA 3000 0.397 MDNKHWVGIKVGWKDPFISHLMFTTDLLLFGQATESQIANMMEVLDDLCAASGQLISKEKTRIMFSSNTPVGIRKNIATLYGFREVEDLGLYLGVPLSGKSPRINNYQFLMDKVCAKLSHLKCNQLSFDGRVTLSKLVIEALPTYSMMSSKNFAREWATNSKFIQWEIGDGASIKAWDDYWVQVGRKLHNVMFNHGLSATDTMLIDLVNINDNWNLRVIKDNILGPIVQQIRAIAPPHRNSWHKDCCIWSGTANGLFPIASSYELRDTSIHVAHARKWSRIWKLVVPERICFHVWMIHIQGLKTNQLLFQRKLRNSFCGNCNGVVESLLYWRNQFIHTPNFVFHDSLSEVVKLFVAQYNRVMLLQKKVLRIGQNGHHVGWTPAAEEWAIINVDGVVSIRGISNGVRTLLSCGGVHEGIQLAKKFNLPKVEFQVDNVQVVKYISTSKPLRKFGLSLVRKIQEDLKSLDNYHFKHILRVENMCAALSLRVVGGGGVTRVMGFIMCVPPTLVFWPECFPQVVKPLPHSVCVGIVVLFMSWWFLMKKENNSEIKIPKGNSGWPLIGETLDFVASCYSSRPVTFMENRKSIYGDVFKTNILGSNLIISTDPEVNKVILHNQKNIFIPAYPKSIKELMGEHSILQLNGNKHKKLHSIIAVFLKSPQFKARITTDIEHSVKQRLASWTNKTIYIQDEVKKITFPILNKVLMSVGPGEDLDLLKREFEVFIKGLICLPIKFPGTTLYKSLKAKERMMKMVRKIVEERKNQIVDNNEVNDVVDVLLRGKDELSQSSSSSSNLELEMISQNIIEMMIPGEETLPTAMTLALKFLSDSPLALSKLMEENMELKKQKTDNSEDYRWTDYMSLPFTQNVISETLRMANIVNGIWRKAVQDVEIKGYLIPKNWSVMACLISVHLDPKNYENPFKFDPWRWEKIEVLASNIRFAPFGGGHRLCPGLELSRLELSIFLHNLVTTYRWVAEKDEIVYFPTVKMKKKLPIRVQPINA* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3559 999 Coils Coil 831 851 - -
Psa2g3559 999 Pfam Reverse transcriptase-like 412 482 IPR002156 GO:0003676|GO:0004523
Psa2g3559 999 Pfam Cytochrome P450 552 976 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3559 999 PANTHER CYTOCHROME P450 26 525 994 - -
Psa2g3559 999 SUPERFAMILY Cytochrome P450 549 996 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3559 999 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 941 950 IPR017972 GO:0005506|GO:0016705
Psa2g3559 999 Gene3D Cytochrome P450 540 997 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3559 999 PRINTS P450 superfamily signature 808 825 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3559 999 PRINTS P450 superfamily signature 865 876 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3559 999 PRINTS P450 superfamily signature 939 948 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3559 999 PRINTS P450 superfamily signature 948 959 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3559 999 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 525 994 - -
Psa2g3559 999 PRINTS E-class P450 group IV signature 578 601 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3559 999 PRINTS E-class P450 group IV signature 860 876 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3559 999 PRINTS E-class P450 group IV signature 909 927 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3559 999 PRINTS E-class P450 group IV signature 932 948 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g3559 999 PRINTS E-class P450 group IV signature 948 966 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3559 Psa-Chr2 388369164 388380851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3559 551 892 Cytochrome P450 AT4G36380 65.116 2.80e-153 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3559 K12637 - gmx:100799030 713.761