Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3551 ATGGATTTCGGCAAAGATATTGAGAAGATATTCGCTGCAATCCCTAAACAACGACAGACACTTATGTTTTCTGCAACAATTCCCGACGAGGTGCGCCAAGTCTGCCATATTGCTATGAAAGGGATTTTGAATATATTAATACAGTTCAGGAGGGTAGTGAGGATACACATTCACACAGATGATGTTGACTACAAGGTTCTTGTTTTCTGCACAACCGCTATGGTCACAAGACTTGTTGCTGATCTCCTTGGGGAGTTGAACTTGAATGTGAGAGAAATCCATTCAAGAAAGCCTCAGAGTTATAGAACCAGAGTTTCTGATGAATTCCGGAAGTCAAAGGGTCCTCATCTGGTTACTTCGGATGTATCTGCACGTGGAGTTGATTAA 387 0.4186 MDFGKDIEKIFAAIPKQRQTLMFSATIPDEVRQVCHIAMKGILNILIQFRRVVRIHIHTDDVDYKVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQSYRTRVSDEFRKSKGPHLVTSDVSARGVD* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3551 128 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 25 63 128 - -
Psa2g3551 128 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 25 1 41 - -
Psa2g3551 128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 128 IPR027417 -
Psa2g3551 128 Gene3D - 48 128 IPR027417 -
Psa2g3551 128 Gene3D - 1 47 IPR027417 -
Psa2g3551 128 PANTHER RNA HELICASE 63 128 - -
Psa2g3551 128 PANTHER RNA HELICASE 1 41 - -
Psa2g3551 128 Pfam Helicase conserved C-terminal domain 58 128 IPR001650 -
Psa2g3551 128 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 51 128 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3551 Psa-Chr2 387328270 387329133 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3551 1 128 Eukaryotic Initiation Factors Gene Family AT5G11170 25.676 5.06e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3551 - - adu:107463398 180.259