Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3534 ATGCATGCGTTTCTTCTCATTTTGGTACTTTGCGCACCGTTCTTATCCTACGCCGATCGTAGTGCAATAACCGTTACAGAGATCCAAGCCTTAACGTCGTTTAAGCTCAACCTCCATGATCCTCTCGGAGCTCTCGACGGTTGGGATACATTCTCGCCGGAAGCGCCGTGTGACTGGCGCGGAGTTGCCTGCAATAACGACCGAGTTACTGAGCTGCGTTTGCCTCGTCTTCAACTCGGTGGTAGACTCAGTGAACGTCTTTCTGAGTTGCGCATGTTAAAGAAGATAAGCCTTCGTTCGAATTTCTTCAACGGAAGTATTCCCTCGTCGCTCATGAAATGTAAGCTTCTACGGTTCTTGTTCTTGCAGGATAATGCGTTTTCTGGTAACGTTCCGCCGGAGATCGGGAACCTCACCGGTCTTCAGATTCTCAACGTTGCACAGAATCATCTCTCTGGGATTATTCCGAGGGAGCTTCCTCTTAGTCTCAAGTACCTTGACCTTTCGTCGAACACTTTCTCCGGCGAGATTCCGAGTACTGTTGCTAATCTGTCTCATCTTCAACTTATCAACCTCTCGTACAATGAGTTCTCCGGTGAGATTCCGGTGATGTTTGGGGAGCTTCAGAAGCTGCAATATCTCTGGCTTGACCATAACTTTCTTGGAGGAACGTTACCTTCTGCACTTGCTAATTGCTCTTCGCTCGTGCATCTGAGCGCAGAGGGAAATGCACTCGGCGGCGTGCTTCCGTCGGCGATTTCGGCGCTTCCGAATCTTCAGGTGATTTCTCTTTCTCAGAACAATCTTACTGGTTCCATTCCTGCTTCCGTTTTCTGCAATGTTTCGTTCCACGCGCCGTCTCTGCGGATAGTTCAACTTGGATTTAATGGTTTCACGGGTTTCGTTGGGCTCGAGACCAGCACGTGTTTTAGTCTTCTTCAGGTTTTGGATATTCAACACAATAGTATAAGAGGCACGTTTCCCTTGTGGTTAACCAATATAACCACGTTGTCAGTGCTTGATCTTTCCAGCAATGCACTTTCCGGCGAGGTTTCGCCATATATAGGAAATCTTGCTGCGTTGAAGGAGTTGAAGATGGCTAATAATTCATTTACTGGTGTCATTCCGGTGGAAATCAAGAAATGTGGGTCCCTCAGTGTTGTTGATTTTGAAGGCAACAATTTTGCCGGAGAAGTTCCTTCTTTTTTTGGTGACATGAAGGGACTCAAGGCTCTATCTCTCGGTGGAAATAGCTTCTTTGGTTCAGTTCCGGAGAGTTTTGGTAACCTTTCCTTACTTGAAACGTTGAGTTTGAGAAGCAATAGATTAAATGGAACTATGCCTGAAATGATAATGAGGTTGATCAACTTGACAACACTGGACCTTAGTGATAACAAGTTTACAGGTGAAATTTATGATAGTATTGGGAGTTTGAATAGATTAATAGTTCTCAATCTGAGTGGTAATGGCTTCTCTGGAAAAATTCCTTCTAGTTTGGGAAATCTTTTCAGACTAACTACACTTGATTTGAGTAAGCAGAATCTCTCTGGGGAGTTACCTTTTGAGCTCTCTGGGCTACCAAATCTGCAGGTCATTGCTCTGCAGGAGAACAAGTTTTCTGGTACAGTACCTGAAGGGTTCAGCAGTTTGATGAGTTTGGAGTATGTGAATCTCAGCTCTAATGCATTTTCTGGGTATATTCCTGAGAACTATGGTTTTCTTAGATCCTTGGTTGTTCTTTCACTGTCTCATAATCACATTAGAGGAACAATTCCTTCTGAAATTGGAAACAGCTCTGATATAGAAATTCTTGAGCTTCGATCAAATTCATTGTCAGGTCGTATTCCTACGGATCTATCTCACCTCACCCATTTGAAAGTGCTTGATTTGGGTGGTAACAATTTTACTGGGGATATGCCTGAGGAGATCTCCAAATGTCTATTGTTAACTACATTGTTAGTAGATCACAACCATCTTTCCGGTGCCATACCAGGGTCATTGTCGAATCTATCAAAGCTAGCAATGCTGGATCTGTCTACTAACAACTTGAGTGGGGAAATTCCTAGTAATTTTTCTATGATCCCTGATTTGGTGTATTTCAATGTGTCGGGGAACAATTTGGAAGGTGAGATACCACAAACTTTGGGATCTCGGTTCAACAACCCTTCTCTATTTTCTGATAATCAGGGTTTATGTGGAAAGCCATTGGAATCAAAGTGCGAGAGAGTAAACAATAGGGACAAAAAGAGGTTGATAGTGTTGATTATCATCATTGCAACAGGAGCTTGCATATTAGTCCTTTTTTGCTGTTTTTACATCATCGGCTTATGGAGATGGCGCAAGAAGCTCAAAGAAAAGGTCTCCGGGGAGAAAAAAAGGAGCCCTGCAAGAGCAAGTTCAGGAGCAAGTGGAGGTCGTGGTAGCAGTGAAAATGGTGGGCCAAAACTCGTGATGTTCAACACCAAAGTTACACTTGCAGAAACAATTGAAGCAACAAGACAGTTTGACGAAGAAAACGTACTAAGCAGAACAAGGTATGGATTAGTATTCAAGGCCTGTTACAATGATGGAATGGTCCTTTCCATTCGCAGGCTCCCTGATGGATCATTGGATGAGAACATGTACCGAAAAGAAGCTGAATCTCTAGGAAAAATAAAGCACAGAAATTTAACTGTTCTCAGAGGTTATTATGCAGGACCACCAGATATGCGACTCTTGGCCTATGATTACATGCCCAATGGAAACCTTGCAACTCTCCTCCAAGAAGCTTCACACCAAGATGGTCATGTTCTAAATTGGCCAATGCGACATCTCATTGCACTAGGAATCGCCCGTGGATTAGCCTTCATTCACCAATCCTCAATGGTCCATGGCGATGTGAAACCTCAAAATGTTCTATTCGATGCGGATTTCGAAGCCCATTTATCAGATTTCGGGTTAGAAAGACTGACAGTAGCAACTCAAGGAGAAGCAGCCTCCAGTTCATCTTCAGTTGGCACTTTGGGTTACGTTTCACCAGAAGCAATCTTAACCAGTGAAGTCACGAAAGAGTCCGATGTTTACAGCTTTGGCATTGTGTTGTTAGAACTTCTAACAGGAAAGAGACCGGTAATGTTCACTCAGGATGAAGACATAGTGAAGTGGGTGAAAAAACAACTTCAGAGGGGTCAAATAACAGAGCTATTAGAACCAGGTTTACTTGAGTTGGACCCAGAATCATCCGAGTGGGAAGAGTTTTTACTAGGTGTAAAAGTTGGATTGCTTTGCACAGCACCAGACCCTCTTGATCGACCAACCATGTCCGACATTGTTTTCATGCTCGAAGGTTGTCGTGTTGGTCCTGATATCCCATCCTCCGCAGATCCCACCTCTCATCATTCTCCGGCATAA 3390 0.4381 MHAFLLILVLCAPFLSYADRSAITVTEIQALTSFKLNLHDPLGALDGWDTFSPEAPCDWRGVACNNDRVTELRLPRLQLGGRLSERLSELRMLKKISLRSNFFNGSIPSSLMKCKLLRFLFLQDNAFSGNVPPEIGNLTGLQILNVAQNHLSGIIPRELPLSLKYLDLSSNTFSGEIPSTVANLSHLQLINLSYNEFSGEIPVMFGELQKLQYLWLDHNFLGGTLPSALANCSSLVHLSAEGNALGGVLPSAISALPNLQVISLSQNNLTGSIPASVFCNVSFHAPSLRIVQLGFNGFTGFVGLETSTCFSLLQVLDIQHNSIRGTFPLWLTNITTLSVLDLSSNALSGEVSPYIGNLAALKELKMANNSFTGVIPVEIKKCGSLSVVDFEGNNFAGEVPSFFGDMKGLKALSLGGNSFFGSVPESFGNLSLLETLSLRSNRLNGTMPEMIMRLINLTTLDLSDNKFTGEIYDSIGSLNRLIVLNLSGNGFSGKIPSSLGNLFRLTTLDLSKQNLSGELPFELSGLPNLQVIALQENKFSGTVPEGFSSLMSLEYVNLSSNAFSGYIPENYGFLRSLVVLSLSHNHIRGTIPSEIGNSSDIEILELRSNSLSGRIPTDLSHLTHLKVLDLGGNNFTGDMPEEISKCLLLTTLLVDHNHLSGAIPGSLSNLSKLAMLDLSTNNLSGEIPSNFSMIPDLVYFNVSGNNLEGEIPQTLGSRFNNPSLFSDNQGLCGKPLESKCERVNNRDKKRLIVLIIIIATGACILVLFCCFYIIGLWRWRKKLKEKVSGEKKRSPARASSGASGGRGSSENGGPKLVMFNTKVTLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENMYRKEAESLGKIKHRNLTVLRGYYAGPPDMRLLAYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFIHQSSMVHGDVKPQNVLFDADFEAHLSDFGLERLTVATQGEAASSSSSVGTLGYVSPEAILTSEVTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSHHSPA* 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3534 1129 Gene3D Ribonuclease Inhibitor 303 382 IPR032675 -
Psa2g3534 1129 Gene3D Ribonuclease Inhibitor 383 455 IPR032675 -
Psa2g3534 1129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 955 967 IPR008271 GO:0004672|GO:0006468
Psa2g3534 1129 SUPERFAMILY L domain-like 25 347 - -
Psa2g3534 1129 Gene3D Ribonuclease Inhibitor 456 744 IPR032675 -
Psa2g3534 1129 Gene3D Ribonuclease Inhibitor 161 302 IPR032675 -
Psa2g3534 1129 SMART serkin_6 835 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3534 1129 SUPERFAMILY Protein kinase-like (PK-like) 814 1117 IPR011009 -
Psa2g3534 1129 Pfam Leucine rich repeat 433 490 IPR001611 GO:0005515
Psa2g3534 1129 Pfam Leucine rich repeat 162 219 IPR001611 GO:0005515
Psa2g3534 1129 Pfam Leucine rich repeat 575 635 IPR001611 GO:0005515
Psa2g3534 1129 Pfam Leucine rich repeat 504 562 IPR001611 GO:0005515
Psa2g3534 1129 Pfam Leucine rich repeat 649 707 IPR001611 GO:0005515
Psa2g3534 1129 Gene3D Transferase(Phosphotransferase) domain 1 911 1115 - -
Psa2g3534 1129 SMART LRR_typ_2 670 693 IPR003591 -
Psa2g3534 1129 SMART LRR_typ_2 478 502 IPR003591 -
Psa2g3534 1129 SMART LRR_typ_2 574 598 IPR003591 -
Psa2g3534 1129 SMART LRR_typ_2 138 162 IPR003591 -
Psa2g3534 1129 SMART LRR_typ_2 622 646 IPR003591 -
Psa2g3534 1129 SMART LRR_typ_2 256 280 IPR003591 -
Psa2g3534 1129 SMART LRR_typ_2 406 429 IPR003591 -
Psa2g3534 1129 SMART LRR_typ_2 208 232 IPR003591 -
Psa2g3534 1129 SMART LRR_typ_2 430 454 IPR003591 -
Psa2g3534 1129 SMART LRR_typ_2 526 549 IPR003591 -
Psa2g3534 1129 SUPERFAMILY RNI-like 363 718 - -
Psa2g3534 1129 Pfam Protein kinase domain 845 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3534 1129 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1125 - -
Psa2g3534 1129 Gene3D Ribonuclease Inhibitor 24 160 IPR032675 -
Psa2g3534 1129 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Psa2g3534 1129 MobiDBLite consensus disorder prediction 790 809 - -
Psa2g3534 1129 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 3 1125 - -
Psa2g3534 1129 Gene3D Phosphorylase Kinase; domain 1 809 910 - -
Psa2g3534 1129 ProSiteProfiles Protein kinase domain profile. 835 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3534 Psa-Chr2 386285474 386290228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3534 4 1129 Receptor kinase-like Gene Family AT4G36180 68.074 0.0 1484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Psa2g3534 Pkinase 1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3534 - - gmx:100795838 1816.97