Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3526 ATGGGTAGGGTTATCAGAGCACAACGTAAGGGTGCGGGATCAATCTTCAAATCCCACACCCACCACCGCAAAGGACCCGCAAGATTCCGCAGTCTCGATTTCGGTGAAAGAAACGGTTATCTCAAGGGAGTAATCACCGACATCATCCACGACCCCGGTCGCGGTGCACCTCTTGCCAAGGTCACTTTCCGTCACCCATTCCGGTATAAGAAACAGAACGAGCTTTTTGTTTCTGCTGAAGGACTCTACACTGGACAGTTTATTTATTGCGGGAAGAAAGCTACTCTTGTTGTTGGTAATGTTTTGCCTGTTAGGTCTATTCCTGAAGGAGCTGTTATTTGTAACGTTGAACACCATGTTGGTGATCGCGGTGCTTTCGCTAGATGTTCTGGTGATTATGCTATTGTTATTAGTCATAATCCTGATAATGATACATCTAGGGTTAAGCTTCCATCTGGGGCAAAAAAGATTATTCCAAGTGGTTGCAGGGCTATGATTGGCCAAGTTGCTGGTGGAGGAAGAACAGAGAAGCCACTTCTTAAGGCCGGTAATGCTTACCACAAATTTAGAGTAAAGAGGAATTGTTGGCCTAAGGTTCGTGGTGTGGCTATGAATCCAGTTGAACATCCTCATGGAGGAGGTAACCACCAGCATATTGGACATGCTAGTACTGTTAGACGTGATGCTCCTCCCGGGCAGAAGGTTGGTCTTATTGCTGCTAAGAGAACTGGTCGACTTAGGGGGCAGGCTGCCGCTACTGCTTCTAAGGCTGACTGA 777 0.471 MGRVIRAQRKGAGSIFKSHTHHRKGPARFRSLDFGERNGYLKGVITDIIHDPGRGAPLAKVTFRHPFRYKKQNELFVSAEGLYTGQFIYCGKKATLVVGNVLPVRSIPEGAVICNVEHHVGDRGAFARCSGDYAIVISHNPDNDTSRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAAKRTGRLRGQAAATASKAD* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3526 258 PANTHER 60S RIBOSOMAL PROTEIN L8 1 258 - -
Psa2g3526 258 SMART Ribosomal_L2_2 11 90 IPR002171 GO:0003735|GO:0005840|GO:0006412
Psa2g3526 258 Pfam Ribosomal Proteins L2, C-terminal domain 98 225 IPR022669 GO:0003735|GO:0005840|GO:0006412
Psa2g3526 258 PANTHER RIBOSOMAL PROTEIN L2 1 258 IPR002171 GO:0003735|GO:0005840|GO:0006412
Psa2g3526 258 SUPERFAMILY Translation proteins SH3-like domain 99 246 IPR008991 -
Psa2g3526 258 Gene3D - 90 169 IPR014722 -
Psa2g3526 258 SMART Ribosomal_L2_C_2 96 231 IPR022669 GO:0003735|GO:0005840|GO:0006412
Psa2g3526 258 SUPERFAMILY Nucleic acid-binding proteins 1 97 IPR012340 -
Psa2g3526 258 Gene3D - 1 86 IPR012340 -
Psa2g3526 258 Pfam Ribosomal Proteins L2, RNA binding domain 14 90 IPR022666 GO:0003735|GO:0005840|GO:0006412
Psa2g3526 258 ProSitePatterns Ribosomal protein L2 signature. 197 208 IPR022671 GO:0003735|GO:0005840|GO:0006412
Psa2g3526 258 PIRSF RPL2p_RPL2a_RPL8e_RPL2o 1 255 IPR002171 GO:0003735|GO:0005840|GO:0006412
Psa2g3526 258 Gene3D Ribosomal protein L2, domain 3 170 247 IPR014726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3526 Psa-Chr2 385948712 385950745 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3526 1 258 Cytoplasmic Ribosomal Protein Gene Family AT4G36130 91.085 0.0 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3526 K02938 - mnt:21409345 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3526 2 385948712 385950745 Psa2g3526 2 385948712 385950745 ECH