Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3522 ATGGCCATGAGAAAATCCAACAAACTTCCACAAGCTGAAGTTATCAAGCAAATTCTCAAAAGATGTTCAAGTTTTGGGAAAAAACATGGTTACAATGAAGAGGATCTTCCTGAGGATGTACCAAAAGGTCATTTTGCAGTTTATGTTGGTGAGAATAGAACAAGGTACATTATCCCAATTTCTTGGCTATCACATCCTCAATTTCAAAGTTTGTTACAAAGAGCTGAAGAGGAGTTTGGTTTCAATCATGATATGGGACTTACTATCCCTTGTGATGAACTTGTTTTTGAGTCATTAACTTCATTGATGAGATAA 315 0.3556 MAMRKSNKLPQAEVIKQILKRCSSFGKKHGYNEEDLPEDVPKGHFAVYVGENRTRYIIPISWLSHPQFQSLLQRAEEEFGFNHDMGLTIPCDELVFESLTSLMR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3522 104 Pfam Auxin responsive protein 27 102 IPR003676 GO:0009733
Psa2g3522 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Psa2g3522 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3522 Psa-Chr2 385833050 385834219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3522 3 103 Calmodulin-binding Proteins AT4G34750 45.098 4.94e-23 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3522 2 385833050 385834219 Psa4g2297 4 187093653 187093970 ECH
Psa2g3522 2 385833050 385834219 Psa2g3522 2 385833050 385834219 ECH
Psa7g4170 7 339364422 339365909 Psa2g3522 2 385833050 385834219 ECH
Psa2g3522 2 385833050 385834219 Psa4g2297 4 187093653 187093970 PCT